Gene Information

Name : HPL003_14590 (HPL003_14590)
Accession : YP_005075892.1
Strain : Paenibacillus terrae HPL-003
Genome accession: NC_016641
Putative virulence/resistance : Virulence
Product : Mn2+ ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3132146 - 3132910 bp
Length : 765 bp
Strand : +
Note : COG1121 ABC-type Mn/Zn transport systems, ATPase component

DNA sequence : 
ATGAGGCATTCACCGCTTGTGGTTCGTGATTTATCTGTAGCTTATCAAAAAAAGCCCGTTTTGCTTGACGTTTCCTTCGA
GGTACCGGAAGGCAAGCTGATTGGGATTATCGGTCCGAACGGGGCTGGGAAGTCCACGCTGATCAAGGCTGCGCTGGGAC
TAATACCGAAGCTCAGGGGCGAGGTGTTGGTTTACGGCAAGCCTTATAAACAGCAGTTGCTCAAGGTTGGTTATGTGCCG
CAACGTGAGTCGGTAGATTGGGACTTTCCAACGAATGCGCTGGATGTGGTCATGATGGGACGATACGGCAGACTGGGCTG
GTTCAAGCGGCCGGGAGCCGCTGATCGTCAGGCTGCGCTGGAGAGTCTGGATAAGGTAGGTATGAGCGACTATGCGGACA
GGCAGATCAGTCAGTTATCCGGCGGGCAGCAGCAACGTGTTTTTTTGGCCAGAGCGCTTGCGCAGGACGCTCAGCTTTAT
TTTATGGATGAACCGTTTGTAGGTGTAGACGCTGCAACAGAAAAAGCCATTATTTCATTGCTCACTGACTTGAAGCGGCA
AGGAAAAACCGTACTTGTCGTTCATCATGATTTGTCTACGGTCACAGAATATTTTGATCAGGTCATGCTGCTGAACGGGC
ATCTGATGGCGTTCGGAGAGACGGCAGCTATTTTCACCGAGGAAAATCTGCAACGTACGTATGGCGGACGTCTGAGTATA
CTCAAAACAGGTTCGGATTCCGGCGCGATACTTGGAGTGAGGTGA

Protein sequence : 
MRHSPLVVRDLSVAYQKKPVLLDVSFEVPEGKLIGIIGPNGAGKSTLIKAALGLIPKLRGEVLVYGKPYKQQLLKVGYVP
QRESVDWDFPTNALDVVMMGRYGRLGWFKRPGAADRQAALESLDKVGMSDYADRQISQLSGGQQQRVFLARALAQDAQLY
FMDEPFVGVDAATEKAIISLLTDLKRQGKTVLVVHHDLSTVTEYFDQVMLLNGHLMAFGETAAIFTEENLQRTYGGRLSI
LKTGSDSGAILGVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 2e-52 48
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 1e-52 48
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-53 45
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-53 44
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-53 44
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-53 43
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-53 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPL003_14590 YP_005075892.1 Mn2+ ABC transporter ATPase BAC0400 Protein 6e-70 63
HPL003_14590 YP_005075892.1 Mn2+ ABC transporter ATPase BAC0440 Protein 7e-49 44
HPL003_14590 YP_005075892.1 Mn2+ ABC transporter ATPase BAC0350 Protein 1e-53 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPL003_14590 YP_005075892.1 Mn2+ ABC transporter ATPase VFG0526 Protein 1e-53 43