Gene Information

Name : HPL003_14550 (HPL003_14550)
Accession : YP_005075884.1
Strain : Paenibacillus terrae HPL-003
Genome accession: NC_016641
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3124190 - 3126226 bp
Length : 2037 bp
Strand : +
Note : COG2216 High-affinity K+ transport system, ATPase chain B

DNA sequence :
TTGATCATGAAGGAACAACGCAAACGCATGCTGGATAAAAGCATCTTGAAGCATGCGATCAAGGATAGCTTTATGAAATT
AAATCCGATGATCATGATGAAAAATCCTGTCATGTTCGTCGTGGAAATCGGCACATTGGTCGTGCTGCTGATGCTGCTGT
TTCCCGGTTATTTTGGAACTGGCAACGAAATGGGTTTTAATCTGGCGGTTTTTATGATCCTGTTGTTCACGTTGCTCTTT
GCTAACTTTGCCGAAGCGCTCGCGGAGGGACGGGGTAAGGCGCAGGCTGCCTCTTTGAAAAAATCCAAGCAGGATACACA
AGCAAACAAGCTTGTCGGGAATGAGATTCAGGTGGTCAGCTCGACCGAGCTGCGCAAAGGTGACATTGTGATGGTGTCCC
AGGGCGAGATGATTCCGAGCGATGGTGAGGTTATTGAGGGTCTTGCCTCAGTGGATGAATCGGCGATTACGGGAGAATCG
GCCCCGGTGATCAAGGAATCGGGTGGTGATTTTTGCTCGGTAACCGGCGGGACGCGTGTGGTCAGTGACCGGATAAAGGT
GCGGATTACAACAGAACCGGGCGAGACGTTCATTGATAAAATGATTTCGCTCGTGGAGGGCGCACAGCGGCAAAAGACGC
CGAACGAAATTGCGCTGAATACCCTGCTGATCAGCTTAACGATTATTTTTCTAATCGTGGTGGTGACACTGGCACCGATT
GCTCGTCATTTTAACATCGATCTGCCTGTTCCCGTGCTTATCTCGTTACTGGTCTGTCTGATTCCGACGACGATTGGAGG
ACTGCTGTCAGCCATCGGGATTGCCGGTATGGACCGGGTCACCCAATTTAACGTGCTGGCGATGTCAGGTAAGGCGGTAG
AAGCATCCGGGGACATCAATACAATGATTCTGGACAAAACGGGTACAATTACCTTCGGTAACCGGATGGCGAGCCAATTC
GTGCCTGTAGGGGGCGTAGAGGAGACGGAGTTAGTAAAGTGGGCTGCGATGAGCTCGATGAAGGATGAGACGCCCGAGGG
GCGCTCCGTTCTGGAGTTGATGCGCAAGCAGGAGTACACACTGGATGAATCCTTGGCAGCAGGAGGGGCCTTTATCGAGT
TCAAGGCGGAAACCCGGATGAGTGGTCTGGATCTGGCCGATGGACGAAAGGTACGTAAGGGCGCGGTGGACTCTGTCCGG
CAGTGGGTACTATCGCAAAATGGTAGCATTCCAGCCGATCTGGAGGAAAAAGCGAATCAGGTGGCCTCTGAAGGAGGTAC
GCCGCTGGCTGTCGCGCTGGATGATCAGATGTATGGCATTATTTATTTGAAGGACACGGTGAAGCCGGGCATGAAGGAGC
GGTTCGATCAGCTCCGGGAAATGGGTATCCGTACGATCATGTGTACCGGGGATAATCCGCTGACTGCCGCGACGATTGCG
CGGGAAGCGGGTGTGGATGATTTTGTGGCTGAAAGCAAGCCGGAGGATAAGATCGCGGTTATCCGTCGTGAGCAGGAGCT
GGGCAAGCTGGTTGCCATGACCGGGGACGGTACGAATGATGCTCCTGCGCTGGCGCAGGCTGACGTTGGGCTTGCCATGA
ATAGTGGCACGGTCGCAGCCAAGGAAGCCGCCAATATGGTGGACCTGGATTCCGATCCGTCCAAAATTATTGAGGTGGTC
GCTATCGGCAAGCAGTTACTTATGACACGCGGTGCTTTGACGACATTCAGTATCGCGAACGATGTTGCCAAATATTTTGC
CATTATTCCGGCGATGTTCATGCTGGCGATTCCGCAAATGAGCGCATTGAACGTGATGGGGCTTGGCTCTCCGTTGTCCG
CTATTTTGTCGGCACTGATCTTTAATGCTGTTATTATTCCACTTCTGATCCCGCTGGCCATGAAGGGCGTGAAGTATAAG
CCCATGAGCTCGGATCGCCTGCTGGGACGGAATTTGCTGATTTACGGTCTGGGCGGTATGGTGGTGCCGTTTGTCGGCAT
TAAAGCCATTGATTTGCTGGTGCATTTGTGGATTTAA

Protein sequence :
MIMKEQRKRMLDKSILKHAIKDSFMKLNPMIMMKNPVMFVVEIGTLVVLLMLLFPGYFGTGNEMGFNLAVFMILLFTLLF
ANFAEALAEGRGKAQAASLKKSKQDTQANKLVGNEIQVVSSTELRKGDIVMVSQGEMIPSDGEVIEGLASVDESAITGES
APVIKESGGDFCSVTGGTRVVSDRIKVRITTEPGETFIDKMISLVEGAQRQKTPNEIALNTLLISLTIIFLIVVVTLAPI
ARHFNIDLPVPVLISLLVCLIPTTIGGLLSAIGIAGMDRVTQFNVLAMSGKAVEASGDINTMILDKTGTITFGNRMASQF
VPVGGVEETELVKWAAMSSMKDETPEGRSVLELMRKQEYTLDESLAAGGAFIEFKAETRMSGLDLADGRKVRKGAVDSVR
QWVLSQNGSIPADLEEKANQVASEGGTPLAVALDDQMYGIIYLKDTVKPGMKERFDQLREMGIRTIMCTGDNPLTAATIA
REAGVDDFVAESKPEDKIAVIRREQELGKLVAMTGDGTNDAPALAQADVGLAMNSGTVAAKEAANMVDLDSDPSKIIEVV
AIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFMLAIPQMSALNVMGLGSPLSAILSALIFNAVIIPLLIPLAMKGVKYK
PMSSDRLLGRNLLIYGLGGMVVPFVGIKAIDLLVHLWI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-159 61
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-159 61
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 8e-160 61
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 3e-159 61
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-159 61
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-159 61
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 9e-138 56
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-137 56