Gene Information

Name : HPL003_11495 (HPL003_11495)
Accession : YP_005075279.1
Strain : Paenibacillus terrae HPL-003
Genome accession: NC_016641
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2479881 - 2481668 bp
Length : 1788 bp
Strand : +
Note : COG0422 Thiamine biosynthesis protein ThiC

DNA sequence :
ATGAAACCGACAGAAGCAGAAAGAACAGTAGGGAACGTTGTGGATGAACAGACAGGAGGGGTTAAGCCCTTTCCGAGGAG
CCGCAAGGTGTATATTCAAGGCTCGCGACCTGACATTGCCGTGCCGGAACGCGAAATCGCCCTGCATCCCACACATACGC
CACAGGGCACGGAGCATCATGAGCCGTTACGTGTGTACGATACGAGCGGTCCCATGACCGACGAAGCCTATCAGGTTGAT
ATCCGTCAGGGCTTGCCTCCATTACGGCGAGCTTGGGCACTGGAACGGGGCGATGTGGAGGCTTACGAGGGGCGTGCCGT
CAAGCCGGAGGATAACGGGCTGAAGCCCAGCTCAAAATGGGAGACGGTGGAATTCCCTGGCGTCACCAACCGTCCGCTCC
GTGCGCGGCGAGGGCACTGCGTCACGCAAATGCATTATGCGCGGCAAGGGATCATTACGCCCGAAATGGAATTTGCGGCC
ATCCGCGAAGGGGTGGAGCCTGAGTTTGTGCGGCAGGAGCTGGCGGCTGGACGAGCCATCTTGCCTTCAAATATCAATCA
CCCGGAAAGTGAGCCGATGGTGATTGGGCGTCATTTTCACGTGAAGATTAATGCGAACATTGGTAATTCTGCGGTTACAT
CCTCCATCGAAGAGGAAGTGGAGAAAATGACCTGGGCTGTACGCTGGGGTTCGGATACGGTCATGGACCTGTCCACAGGA
CGTAACATCCATACGACGCGTGAGTGGATCATCCGTAACTCCCCTGTGCCGATTGGGACTGTACCGCTGTATCAGGCGCT
TGAAAAGGTGAACGGCGAAGCTGAGGCGCTAACGTGGGAGCTGTATCGTGACACGCTGATTGAGCAGGCGGAGCAGGGCG
TGGACTATTTCACCATTCATGCAGGCGTGCTGCTGCGGTATATTCCGATGACGGCAAGTAGAATGACAGGAATTGTGTCC
CGTGGAGGGTCGATCATGGCGGCCTGGTGCCTTGCGCACCATCAAGAGAACTTTTTGTACACGCATTTTGAAGAAATATG
CGAAATTATGAAAGCCTACGATGTGGCCTTTTCCCTCGGGGATGGTTTGCGTCCGGGTAGTATCTATGATGCGAATGATG
AGGCACAGTTTGCTGAGCTGGATACGTTGGGCGAGTTAACGCAAATTGCCTGGAAGCATGATGTTCAGGTCATGATAGAA
GGGCCGGGACATGTCCCGATGCACAAGATCAAGGAGAATGTGGATCTGCAAATGGAAATTTGCAAGGAAGCTCCATTTTA
TACACTGGGCCCACTCACGACGGATATTGCACCCGGCTACGATCATATTACGTCGGCTATCGGGGCGGCCATGATCGGTT
GGTTCGGGACGTCCATGCTGTGCTATGTTACACCCAAGGAGCATTTGGGCCTGCCGAACAAGGATGATGTTCGTGAAGGA
GTCATTACCTACAAAATTGCGGCACATGCTGCCGACTTGGCCAAAGGCCATCCACGGGCGCAGCAGCGGGACGATGCTTT
GTCCAAGGCACGCTTTGAATTCCGCTGGCGCGATCAGTTCAATCTTTCGCTCGACCCTGAGCGGGCCTTGTCCTACCATG
ATGAGACGCTGCCAGCAGAGGGAGCCAAGGAAGCACACTTTTGTTCGATGTGCGGTCCCAAGTTTTGCAGTATGCGTATC
ACGCAGGACATTCGCGCCTATGCGGCGGATAAGGGGCTGGACACCGAAGAAGCGATAGCCGCCGGGATGCGTGAGAAGGC
GGAGCAGTATCGGGATGCCGGGCAGTAA

Protein sequence :
MKPTEAERTVGNVVDEQTGGVKPFPRSRKVYIQGSRPDIAVPEREIALHPTHTPQGTEHHEPLRVYDTSGPMTDEAYQVD
IRQGLPPLRRAWALERGDVEAYEGRAVKPEDNGLKPSSKWETVEFPGVTNRPLRARRGHCVTQMHYARQGIITPEMEFAA
IREGVEPEFVRQELAAGRAILPSNINHPESEPMVIGRHFHVKINANIGNSAVTSSIEEEVEKMTWAVRWGSDTVMDLSTG
RNIHTTREWIIRNSPVPIGTVPLYQALEKVNGEAEALTWELYRDTLIEQAEQGVDYFTIHAGVLLRYIPMTASRMTGIVS
RGGSIMAAWCLAHHQENFLYTHFEEICEIMKAYDVAFSLGDGLRPGSIYDANDEAQFAELDTLGELTQIAWKHDVQVMIE
GPGHVPMHKIKENVDLQMEICKEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTSMLCYVTPKEHLGLPNKDDVREG
VITYKIAAHAADLAKGHPRAQQRDDALSKARFEFRWRDQFNLSLDPERALSYHDETLPAEGAKEAHFCSMCGPKFCSMRI
TQDIRAYAADKGLDTEEAIAAGMREKAEQYRDAGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 70
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 70
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 66