Gene Information

Name : HPL003_10165 (HPL003_10165)
Accession : YP_005075017.1
Strain : Paenibacillus terrae HPL-003
Genome accession: NC_016641
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2206302 - 2207051 bp
Length : 750 bp
Strand : +
Note : COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

DNA sequence : 
ATGATGCTCTTGGAGGGGCGTGTAGCCGTTGTGACCGGGGCAAGCAGAGGAATCGGTAAATCTATAGCACTCACACTAGC
CAAACAGGGAGCATCTCTGGTTATTAACGGGACCCGTGAAGACCTGCTGCTTGATCTGGCGGCGGAAGTGAATGCGTTGG
GTCAGACATGCGTCGTTTGTGCAGGAGATGTCTCGGATAAAGAAATTGCTCAACAAGTGGTCCGTACCACTATTGAACAT
TTTGGTTGTATAGACATCCTTGTGAATAATGCCGGGATCAACATGCGTACCTCAACCTTGGCAATGGACACTAAGGATTG
GGAAAAGGTGCTGGATGTGAATCTGAACGGTACGTTATATTTGTGCATGGCTGTATTACCCCACATGATTGAAAAAAATT
ACGGGAAAATCGTAAATGTGACTTCTACGACCGCCAAAACTCCGCATCGGAATGCGGCACCATCGTACGGAGCATCTAAA
GCGGGGGTGAATTATTTAACCCAGCATTTGGCCTTGGAGATGGCTAAGCACAATATCTACGTAAATGCCGTATGCCCTGG
CCCGATTGATACCGATATGAGTAAACAATGGACACAGGAATATCGTCAGGAAGCCATCGCCCGCATACCGCTTGGAAAAT
TGGGTACGCCCGAAAATGTAGCTGATACGGTATTATTTTTAGCTTCGAAGATGTCGGACTTTATAACCGGGGAATCGATA
AATATTAACGGTGGGACTTATATGAATTGA

Protein sequence : 
MMLLEGRVAVVTGASRGIGKSIALTLAKQGASLVINGTREDLLLDLAAEVNALGQTCVVCAGDVSDKEIAQQVVRTTIEH
FGCIDILVNNAGINMRTSTLAMDTKDWEKVLDVNLNGTLYLCMAVLPHMIEKNYGKIVNVTSTTAKTPHRNAAPSYGASK
AGVNYLTQHLALEMAKHNIYVNAVCPGPIDTDMSKQWTQEYRQEAIARIPLGKLGTPENVADTVLFLASKMSDFITGESI
NINGGTYMN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 3e-36 42
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 8e-37 42
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 3e-36 42
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 3e-36 41
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 2e-36 41