Gene Information

Name : HPL003_09500 (HPL003_09500)
Accession : YP_005074884.1
Strain : Paenibacillus terrae HPL-003
Genome accession: NC_016641
Putative virulence/resistance : Virulence
Product : N-acetylmannosamine-6-phosphate 2-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2054431 - 2055150 bp
Length : 720 bp
Strand : +
Note : COG3010 Putative N-acetylmannosamine-6-phosphate epimerase

DNA sequence : 
ATGGGATTGGAAGCTGTATTATCAAAAGTTCAGCACGGCCTGATCGTATCCTGTCAGGCACTACCGGATGAACCGCTGCA
CGGATCGGATTCCATGGTCAAAATGGCACGCGCCGCTCAGCAGGGCGGAGCTGTGGCCATTCGCGCCAATGGCGCAGCAG
ATGTGCGTGCGATCAAACAAGCGCTTCCCCTGCCAGTCATCGGCCTGATCAAGCGGGATTATGATGACTCCGATATTTAC
ATTACACCGACCCTTCGAGAGATGGAGGAACTGGTGGATGCGGGCGCAGATATCATCGCCCTGGATGCTACATCACGTCC
GCGCCCGGGGGGATGCAGGCTGAAGCAGCTCATAGATTACGCCCATAAGCATGGAGTGGCCTCCATGGCGGATATATCCA
CACTGGAGGAGGCGCTTCATGCCGCTTCCCTCGGCGTAAGCTGCGTATCCACAACGTTATCCGGTTATACGCCATACTCT
GCTCAGATCGATGGACCCGATCTGGAGTTGGTACGGAGAGCGTCAGAGCTGGTTCCCGTGCCTTTAATTGCGGAGGGCAA
AATCCATGAGCCGGCGCAGGTGGAGGAAGCATTCCGGCTGGGCGCACATGCAGTGGTTGTAGGCTCGGCGATTACCAGAC
CCCAATTGATTACGCAGCGGTTTGCCGATGCCGCAAGGAAGGCAGTGAAATGCATCTATGGAGATGAACGACCGAATTAA

Protein sequence : 
MGLEAVLSKVQHGLIVSCQALPDEPLHGSDSMVKMARAAQQGGAVAIRANGAADVRAIKQALPLPVIGLIKRDYDDSDIY
ITPTLREMEELVDAGADIIALDATSRPRPGGCRLKQLIDYAHKHGVASMADISTLEEALHAASLGVSCVSTTLSGYTPYS
AQIDGPDLELVRRASELVPVPLIAEGKIHEPAQVEEAFRLGAHAVVVGSAITRPQLITQRFADAARKAVKCIYGDERPN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0066 AAM75271.1 EF0066 Not tested Not named Protein 8e-33 48
EF0540 NP_814312.1 N-acetylmannosamine-6-phosphate 2-epimerase Not tested Not named Protein 4e-38 47
VC0395_A1378 YP_001217321.1 N-acetylmannosamine-6-phosphate 2-epimerase Not tested VPI-2 Protein 2e-26 42
VC1781 NP_231416.1 N-acetylmannosamine-6-phosphate 2-epimerase Not tested VPI-2 Protein 2e-26 42
nanE ACA01846.1 N-acetylmannosamine-6-phosphate epimerase Not tested VPI-2 Protein 3e-26 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPL003_09500 YP_005074884.1 N-acetylmannosamine-6-phosphate 2-epimerase VFG1114 Protein 7e-27 42