|
Name : HPL003_07895 (HPL003_07895) Accession : YP_005074565.1 Strain : Paenibacillus terrae HPL-003 Genome accession: NC_016641 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1690464 - 1691747 bp Length : 1284 bp Strand : + Note : COG0172 Seryl-tRNA synthetase DNA sequence : GTGTTAGATATAAAGATTTTACGTAATGAGCTTGGTCGGGTTGAAAAAGCTTTGCAAAATAGAGGGAAATCTCTGGATCT GATAAATGGCTTTACGGATCTGGATGTGCGTCGTCGTGAGTTGCTTCAAGAAAGTGAGGCGCTCAAAAATCGCCGAAATG TCGTATCCGGTGAAGTAGCCAAGTTGAAGAAGAATAAAGAAAATGCGGATGACCTTATTGCTGAGATGCGTCAGGTTTCC GACCGTATTAAAGAATTGGATGAGCAAGTGCGCGAGCTGGAGATTCAGATCGACGAACTGGTAATGTCCATTCCGAATAT CCCCAATGAGTCGGTTCCTGTAGGTGCTTCAGAGGAGGATAATGTAGAGATTCGTCGCTGGTCGGAGCCACGTGAATTTT CTTTTACGCCAAAAGCACATTGGGAGCTGGCACAGGAGCTGGATATTCTCGATTTTGAGGCGGCAGCCAAGGTGACAGGT TCCCGTTTTACGTTCTACAAAGGACTGGGAGCACGCCTGGAGCGTGCGCTGATTAACTTTATGATGGATCTGCATAGCAG TGAGCATGGTTATGAGGAAATGCTGCCTCCATACATTGTGAATCGGGACAGCCTGTATGGCACGGGACAGCTTCCGAAGT TTGAAGAGGATTTGTTCAAGCTGCGCGATACCGAGTATTATCTCATTCCTACGGCTGAGGTTCCGGTAACGAACTATCAC CGCGAAGAGATTATGAACGCGGATCAGCTTCCGAAAAATTATGTGGCATACAGCTCTTGCTTCCGCTCTGAGGCAGGATC GGCAGGAAGGGATACACGTGGTTTGATCCGTCAGCATCAGTTCAATAAGGTAGAGATGCTTAAGCTGGTTCACCCGGACA CCTCCTATGAGGAACTGGAGAAAATGACGAACAATGCAGAGCGTGTTCTGCAACTGCTTGGACTTCCATATCGTGTGCTG GCACTTTGCACCGCGGATATGGGCTTCACGTCTGCCAAAACGTATGATCTGGAAGTGTGGCTGCCTGAGAGTGGCATGTA CCGCGAGATTTCTTCTTGTTCAAATACAGAAGATTTCCAAGCGCGTCGTGCAAACATCCGGTTTCGGCCGGAGCCGAAAG CAAAGCCTGAATTTGTACATACGCTGAACGGTTCAGGATTGGCTGTAGGACGCACAGTGGCTGCTATTTTGGAGAATTAT CAGCAGGAGAACGGAAGCGTTGTAATTCCAGAAGTGCTGCGTTCATACATGCGAGGCGCAGAAGTTATTGCTCCCAAACA GTAA Protein sequence : MLDIKILRNELGRVEKALQNRGKSLDLINGFTDLDVRRRELLQESEALKNRRNVVSGEVAKLKKNKENADDLIAEMRQVS DRIKELDEQVRELEIQIDELVMSIPNIPNESVPVGASEEDNVEIRRWSEPREFSFTPKAHWELAQELDILDFEAAAKVTG SRFTFYKGLGARLERALINFMMDLHSSEHGYEEMLPPYIVNRDSLYGTGQLPKFEEDLFKLRDTEYYLIPTAEVPVTNYH REEIMNADQLPKNYVAYSSCFRSEAGSAGRDTRGLIRQHQFNKVEMLKLVHPDTSYEELEKMTNNAERVLQLLGLPYRVL ALCTADMGFTSAKTYDLEVWLPESGMYREISSCSNTEDFQARRANIRFRPEPKAKPEFVHTLNGSGLAVGRTVAAILENY QQENGSVVIPEVLRSYMRGAEVIAPKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-133 | 62 |
