Gene Information

Name : HPL003_07885 (HPL003_07885)
Accession : YP_005074563.1
Strain : Paenibacillus terrae HPL-003
Genome accession: NC_016641
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1688961 - 1689842 bp
Length : 882 bp
Strand : +
Note : COG0214 Pyridoxine biosynthesis enzyme

DNA sequence :
ATGGAAACGGGAACTTCACGTGTAAAAAGAGGTATGGCAGAGATGCAAAAAGGCGGCGTAATCATGGATGTCATGAACGC
TGAACAGGCTAAAATTGCGGAGGCGGCAGGAGCTACAGCGGTAATGGCTCTTGAACGGGTGCCTTCAGATATCCGTGCAG
CTGGCGGCGTTGCCCGTATGGCTGACCCTACGATTGTGGAAGAGGTCATGAAGGTGGTTTCTATTCCCGTTATGGCTAAG
GCTCGTATCGGCCATTTTGTGGAGGCAAAGGTGCTGGAATCTCTGGGGGTTGACTATCTCGATGAGAGCGAAGTGCTGAC
GCCTGCGGATGAAGTTTTCCATATTGATAAGCGGGAGTTTACCGTTCCATTCGTTTGCGGAGCCAAGGATCTGGGAGAAG
CGTTGCGTCGCATCGGCGAAGGGGCATCCATGATTCGTACAAAGGGTGAGCCTGGAACCGGAAATATTGTCGAAGCTGTT
CGTCATATGCGTTTTATCAATGGCCAAATTCGCAAGGTGCAAAACCTGTCCAAGGACGAGCTGTATGCAGAAGCGAAAAA
CCTTGGCGTTGCTTACGAATTACTGCTGGAAGTGCATGAGCACGGCAAGCTGCCAGTGGTCAACTTTGCAGCGGGCGGCG
TAGCAACACCTGCTGATGCGGCATTGATGATGCATTTGGGTGCTGATGGTGTCTTCGTTGGTTCCGGTATTTTCAAATCC
GATAGCCCTGAGAAATTTGCACGTGCCATCGTGGAAGCGACTACTCATTATACGGACTACAAGCTGATTGCAGAAGTGTC
CAAGAATCTGGGCGCTCCAATGAAGGGCATTGAAATTTCCAAGCTGGCACCGCATGAACGTATGCAGGATCGTGGTTGGT
AA

Protein sequence :
METGTSRVKRGMAEMQKGGVIMDVMNAEQAKIAEAAGATAVMALERVPSDIRAAGGVARMADPTIVEEVMKVVSIPVMAK
ARIGHFVEAKVLESLGVDYLDESEVLTPADEVFHIDKREFTVPFVCGAKDLGEALRRIGEGASMIRTKGEPGTGNIVEAV
RHMRFINGQIRKVQNLSKDELYAEAKNLGVAYELLLEVHEHGKLPVVNFAAGGVATPADAALMMHLGADGVFVGSGIFKS
DSPEKFARAIVEATTHYTDYKLIAEVSKNLGAPMKGIEISKLAPHERMQDRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 6e-82 65
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-82 65
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 8e-82 65