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Name : lysS (HPL003_07855) Accession : YP_005074557.1 Strain : Paenibacillus terrae HPL-003 Genome accession: NC_016641 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1675595 - 1677121 bp Length : 1527 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGTCGGATGAAACTACTAACCAGGAGCCTCAAGAAAATCGTGAGGAACTAAGCGAACTGCTGCAAATTCGCCGCGCCAA ATTGGACGAGCTTCGCTCGTTAGGTATTGATCCTTTTGGTCGTAAATACATACGCACAGCTGAGGCGGGTGTACTGCTAA GCAAGTATGACAGTCTGACCAAGGAAGAACTGGAAGAGAAGAATATTGAAATTAGCATTGCAGGCCGTATTATGGCTAAG CGTGTTATGGGGAAAGCCAGCTTTGCCCATGTACAGGATCTCAGTGGACGTATTCAAATCTATGTTCGTCAAGATACCGT GCCGGAAGCTAAATACAAAGCGTTTGGTATTTTGGATCTGGGTGACATTGTGGGAATTAAGGGCGTGCTGTTCAAGACCA AAACAGGGGAAACCACCATTAAGGTGCTGGATCTTGAGGTATTGTCCAAATCGTTGTACCCGTTGCCAGAAAAATATCAT GGTCTGAAGGATGTTGAGCTGCGTTACCGTCAGCGCTACGTCGATCTGGTTATGAACCCGGAAGTACAAAAAACGTTCAT TACACGTTCCCGTATTATTCAATCCATGCGCCGTTATTTGGACTCGCTTGGTTATTTGGAGGTTGAAACGCCAACACTTC ATTCCATTGCAGGCGGCGCGGCGGCCAAGCCGTTTATTACACATCATAATGCATTGGACATGCAGCTATATATGCGTATT GCCATTGAACTTCATCTGAAACGACTGATTGTCGGCGGATTGGAGAAAGTATATGAGATCGGTCGCGTTTACCGTAATGA AGGTATTTCCACTCGCCATAACCCTGAGTTCACGATGATTGAGCTGTATGAAGCGTATGCTGACTACCAGGACATCATGC AATTGACGGAAAACATGGTGGCTCACATTGCGCAAGAAGTGCTTGGTACACAGCGCATTCATTATCAGGGCCAGGAAGTG GACCTGACGCCGCAATGGCGCAGAGTATCTATGGTTGATGCTGTTAAAGAAGTAACAGGCGTGGATTTTGGCGTACAATT GAGCAATGAAGAAGCTCATCGCCTTGCGAAAGAGCATAAAGTGCCGGTAGAGCCGCATATGACCTTTGGACATATCCTGA ATGCCTTCTTCGAACAATTCGTAGAGGAAACACTCATTCAACCGACCTTTATTACGGGGCATCCGGTTGAAATCTCACCA CTGGCGAAGAGAAACGAGCAAGATCCACGCTTTACGGATCGTTTTGAGCTGTTCGTGGTAGCTCGTGAGCATGCGAATGC ATTCACTGAGCTAAATGATCCGATTGACCAACGTCAACGTTTTGAAGCACAACTGCTGGAACGTGAGCACGGCAATGACG AGGCTCATGAAATGGATGATGATTTTATCCGTGCCTTGGAATACGGTATGCCGCCAACAGGCGGACTGGGCATCGGTATC GACCGCTTGGTCATGTTGCTGACGGATGCTCCTTCCATTCGCGATGTGCTGCTTTTCCCGCATATGCGTAACCGTACGGT AGAATAA Protein sequence : MSDETTNQEPQENREELSELLQIRRAKLDELRSLGIDPFGRKYIRTAEAGVLLSKYDSLTKEELEEKNIEISIAGRIMAK RVMGKASFAHVQDLSGRIQIYVRQDTVPEAKYKAFGILDLGDIVGIKGVLFKTKTGETTIKVLDLEVLSKSLYPLPEKYH GLKDVELRYRQRYVDLVMNPEVQKTFITRSRIIQSMRRYLDSLGYLEVETPTLHSIAGGAAAKPFITHHNALDMQLYMRI AIELHLKRLIVGGLEKVYEIGRVYRNEGISTRHNPEFTMIELYEAYADYQDIMQLTENMVAHIAQEVLGTQRIHYQGQEV DLTPQWRRVSMVDAVKEVTGVDFGVQLSNEEAHRLAKEHKVPVEPHMTFGHILNAFFEQFVEETLIQPTFITGHPVEISP LAKRNEQDPRFTDRFELFVVAREHANAFTELNDPIDQRQRFEAQLLEREHGNDEAHEMDDDFIRALEYGMPPTGGLGIGI DRLVMLLTDAPSIRDVLLFPHMRNRTVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 7e-122 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005074557.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 4e-122 | 49 |
