Gene Information

Name : HPL003_00590 (HPL003_00590)
Accession : YP_005073125.1
Strain : Paenibacillus terrae HPL-003
Genome accession: NC_016641
Putative virulence/resistance : Unknown
Product : ribonuclease ph:ham1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 128739 - 129500 bp
Length : 762 bp
Strand : -
Note : COG0689 RNase PH

DNA sequence :
ATGAGTAGATCTAACGGACGAAACGGTGATGAGCTGCGCCCGATGAAATTGACAGCAGGAGTAAATAAGTATGCGGAGGG
CTCTGTTTTTATAGAGGTTGGCGAGACGAAAGTCATCTGTACAGCTACTGTGGAAGAACGCGTTCCACCCTTTATGAAGG
GACAAGGAAAGGGCTGGGTGACCGCAGAGTATTCCATGCTTCCGCGCGCGACCCATACGCGTAATCAGCGCGAGGCTGCA
CGTGGGAAGCTGACAGGCCGGACGATGGAGATTCAACGTCTGATTGGAAGAGCGCTGCGTTCGGTTGTGAATTTGCAGGC
GCTGGGTGAGCGGACGATTACGCTGGATTGTGACGTGATTCAGGCGGATGGCGGCACACGCACGACTTCAATTACGGGTT
CCTTCGTAGCGCTAGCGATTGCTGTGAATAAAATTGCGCTACAGCACAAGCTGCCTGTTTTTCCAATTACTGATTTTCTG
GCATCCGTCAGCGTGGGGGTTGTTGGCGGCAAAGCGCTGTTGGATCTTAACTATGAAGAGGACTCCAAGGCCAAGGTAGA
CATGAACCTTGTGATGACGGGCGGCGGCAAGTATGTCGAGCTGCAAGGTACGGGTGAAGAAAGTCCGTTCGACCGTCAAG
AGCTGGATCAACTGCTCAGCTTGGGTGAACAAGGAATTCTGCAAATGATCGAGCGTCAAAAAGAAGTGCTCGGCCCGATT
GCAGACAAGATCGGAGCAAGACGTGCGGGGGCTGGGGCCTGA

Protein sequence :
MSRSNGRNGDELRPMKLTAGVNKYAEGSVFIEVGETKVICTATVEERVPPFMKGQGKGWVTAEYSMLPRATHTRNQREAA
RGKLTGRTMEIQRLIGRALRSVVNLQALGERTITLDCDVIQADGGTRTTSITGSFVALAIAVNKIALQHKLPVFPITDFL
ASVSVGVVGGKALLDLNYEEDSKAKVDMNLVMTGGGKYVELQGTGEESPFDRQELDQLLSLGEQGILQMIERQKEVLGPI
ADKIGARRAGAGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 4e-54 54