Gene Information

Name : NIES39_O04300 (NIES39_O04300)
Accession : YP_005072215.1
Strain : Arthrospira platensis NIES-39
Genome accession: NC_016640
Putative virulence/resistance : Virulence
Product : nucleotide sugar epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5966103 - 5967104 bp
Length : 1002 bp
Strand : -
Note : -

DNA sequence :
GTGAAAATATTAGTAACTGGTGCGGCGGGATTTATTGGATTTCATCTGTGTCAACATTTATTGAAAAGGGGGGATACAGT
CATTGGCATTGATAATCTCAATGATTATTATGCAGTATCTTTAAAAGAAGACCGGATAGCCCAACTGAAACCCTTAGAAA
AATTTACGTTTTATAAACTAGATTTATGCGATAAAGTCGGCATCAAAAAACTGTTTTCCGAACACCAATTTGAGGCAGTA
GCCCACCTCGCCGCCCAAGCCGGAGTCCGTTACTCTCTGAAAAATCCCTACGCTTATATTGATAGTAATTTAGTGGGGTT
TATCAATGTTTTAGAAGGCTGTCGTCATCATCAAATCCCACACTTGGTTTTTGCTTCTTCTAGTTCGGTTTATGGTTCCA
ATAAAACTGTACCTTTTTCGGTAGGGGATTATGTAGATTATCCAGTTAGTCTGTATGCGGCGACAAAGAAAGCTAATGAA
TTGATGGCTCATAGCTACAGTCACCTGTATCATATTCCCACGACGGGATTAAGATTTTTTACGGTTTATGGTCCTTGGTA
TCGTCCTGATATGGCGATGTTTATTTTTACGAAAGCTATCTTAGCCGACCAACCGATTCCGGTATTTAACTATGGTAATA
TGGAGCGAGATTTTACCTATGTTGATGATGTGGTGGAAGGAGTAATTCGGGTAATTGATAAAATCCCACAACCGGGAAGC
AATCAAGCGGAAATTGAAGGAGTGAAAACCACTGCCCCTTATCAGATTTATAACATCGGTAATAATAAACCGGTAAATTT
ATTGTACTTGATTGAAGTCCTGGAAAATGTCTTAGGGAAAAAAGCCCAGAAAAATATGCTTCCCATGCAGCCGGGAGATG
TGCCGATTACCTATGCTAATGTAGATTCATTGATAGCAGATGTAGGATTTAAACCAAGTACACCCATAGAGGTGGGAGTA
GAAAAATTTGTGGCTTGGTATAAATCCTATTATGGTGTTTAA

Protein sequence :
MKILVTGAAGFIGFHLCQHLLKRGDTVIGIDNLNDYYAVSLKEDRIAQLKPLEKFTFYKLDLCDKVGIKKLFSEHQFEAV
AHLAAQAGVRYSLKNPYAYIDSNLVGFINVLEGCRHHQIPHLVFASSSSVYGSNKTVPFSVGDYVDYPVSLYAATKKANE
LMAHSYSHLYHIPTTGLRFFTVYGPWYRPDMAMFIFTKAILADQPIPVFNYGNMERDFTYVDDVVEGVIRVIDKIPQPGS
NQAEIEGVKTTAPYQIYNIGNNKPVNLLYLIEVLENVLGKKAQKNMLPMQPGDVPITYANVDSLIADVGFKPSTPIEVGV
EKFVAWYKSYYGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1I AAA64648.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-92 60