Gene Information

Name : glnA (NIES39_J00500)
Accession : YP_005069640.1
Strain : Arthrospira platensis NIES-39
Genome accession: NC_016640
Putative virulence/resistance : Virulence
Product : glutamate--ammonia ligase, glutamine synthetase type I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3309760 - 3311181 bp
Length : 1422 bp
Strand : +
Note : -

DNA sequence :
ATGCCCACGACAGCCCAAGAAGTCTTGAGTATGATTCAAGACCAAGATATTAAAGTTATCGACCTGAAATTTATCGATAT
GCCAGGAACCTGGCAGCATTTGACCGTATACTACGATCAGATTGATGAAACTTCCTTCACCGATGGGGTGGCTTTTGACG
GTTCCAGTATTCGGGGTTGGAAAGCCATCAACGAATCCGATATGATGATGGTGCTAGACCCGACAACAGCCTGGTTTGAC
CCCTTCATGGCGGAACCGACCCTGAGCGTGATTTGTAGCATCAAAGAGCCTCGGACGGGGGAATGGTATAGTCGCTGTCC
CAGGGTGATTGCTCAAAAAGCGGTTAACTATTTGAAGGAAACAGGTATTGCCGATACAGCCTTTTTAGGTCCAGAAGCTG
AGTTTTTTGTGTTTGATGATGTCCGCTTTGACCAAAATCAACACTCTGGTTACTACTTTTTAGACTCCATTGAGGGCCGT
TGGAATTCTGGTCGGGAAGAACCAGGAGGTAACTTAGGCTATAAACCCCGTTATAAAGAGGGTTACTTCCCTGTGTCCCC
CACAGATACTATGCAAGACTTGCGGACTGAGATGCTGCTAACCATGGCTCAGTGTGGGGTTCCCATTGAAAAGCATCACC
ACGAAGTAGCCACAGGCGGACAAAATGAACTGGGTATTAAGTTCGGAACCCTGGTAGAAGCTGCTGATAACTTGATGGTT
TACAAATATGTCATCAAGAACGTTGCTAAAAAGTACGGCAAAACCGTCACCTTCATGCCTAAACCAGTTTTTAACGATAA
TGGTTCTGGTATGCACACTCACCAGTCACTCTGGAAAGATGGTCAGCCTTTGTTTGCAGGAGATGGCTATGCTGGATTGA
GCCAAATGGCTTTGCACTATATCGGTGGTATTCTCAAACACGCTCCGGCTTTGTTGGCTCTGACTAACCCAACCACTAAC
TCCTATAAGCGTCTGGTTCCTGGTTTTGAAGCTCCGGTTAACTTGGCTTATTCCCAAGGAAACCGCTCGGCTTCGGTTCG
GATTCCTCTGGCTGGAGATAGCCCTAAAGCCAAGCGTTTTGAGTTCCGCTGTCCTGATGCTACTGCTAACCCCTACCTCG
CCTTTGCAGCTATGCTCTGTGCGGGTATTGATGGCATTAAGAACGAAATTGACCCCGGCGAACCTCTGGATGTGGATATC
TATGATCTCACTCCTGAAGAACTCCGCAAGATTCCTTCAACTCCTGGTTCTTTGGAATTGGCTCTCGAAGCTCTGGAAAA
TGATCATGCCTTCCTCACCGATTGTGGGGTGTTTACGGAAGACTTTATCACTAACTGGATTTCCTACAAACTCGATAATG
AGGTTAACCCCATGCGGTTACGTCCTCACCCGTTTGAGTTTTCTCTCTACTACGATTGCTAA

Protein sequence :
MPTTAQEVLSMIQDQDIKVIDLKFIDMPGTWQHLTVYYDQIDETSFTDGVAFDGSSIRGWKAINESDMMMVLDPTTAWFD
PFMAEPTLSVICSIKEPRTGEWYSRCPRVIAQKAVNYLKETGIADTAFLGPEAEFFVFDDVRFDQNQHSGYYFLDSIEGR
WNSGREEPGGNLGYKPRYKEGYFPVSPTDTMQDLRTEMLLTMAQCGVPIEKHHHEVATGGQNELGIKFGTLVEAADNLMV
YKYVIKNVAKKYGKTVTFMPKPVFNDNGSGMHTHQSLWKDGQPLFAGDGYAGLSQMALHYIGGILKHAPALLALTNPTTN
SYKRLVPGFEAPVNLAYSQGNRSASVRIPLAGDSPKAKRFEFRCPDATANPYLAFAAMLCAGIDGIKNEIDPGEPLDVDI
YDLTPEELRKIPSTPGSLELALEALENDHAFLTDCGVFTEDFITNWISYKLDNEVNPMRLRPHPFEFSLYYDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-105 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_005069640.1 glutamate--ammonia ligase, glutamine synthetase type I VFG1399 Protein 3e-128 57