Name : clpB2 (NIES39_F00620) Accession : YP_005069293.1 Strain : Arthrospira platensis NIES-39 Genome accession: NC_016640 Putative virulence/resistance : Virulence Product : ClpB protein Function : - COG functional category : - COG ID : - EC number : - Position : 2939387 - 2942173 bp Length : 2787 bp Strand : - Note : - DNA sequence : ATGCAACCGACCGATCCGAGTAAATTTACAGATAAAGCCTGGGAAGCGATAGTAAAATCCCAAGATGTTGCTCGTCGCTT CCAAAATCAGCATTTAGAAGTTGAGCACGTGGCGATCGCCGCCTTAGAACAAAATGGACTCGCTAATAATATATTAGGAC GAGCTGGTTTTAACCCCGAACAGGTCCAACAACAATTAGAAGCCTTCACCAAACGACAACCCCGAGTCGGAACTATTGAC CATCTGTACCTAGGTCGTGGGTTAGAATTAATGCTAGATACCGCTGAAGCGACGCGGTCCGCATGGCAAGACCGCTACAT TGCTGTTGAACACCTGATTATTGCCCTAGCAGAAGATGATCGCGTCGGTCGTAGGATTTTGGGAAATGGAAACCCCACCA GAGCCACACCAGGAAGACCAGGGTTCGATCGCCCTACCAATGACTCCAAAGCTACAGTCCGGGAGAAACTCGAAGAAGCC ATTAAATCCATGCGCGGCAGTGCTAAAGTTGACAACCAGAACCCGGAAAACAGTTATGATGCCCTGAGTAAGTATGGGCG AGATTTAACCGAATTGGCTAAATCTGGGAAACTGGACCCAGTGATCGGACGGGATGAAGAAATTCGCCGGGTGGTGAGTT GTCTGTCCAGGCGAACCAAAAATAATCCGGTGTTAATTGGAGAACCGGGAGTCGGTAAAACAGCGATCGCCGAAGGCCTG GCCCAACGCATTGTTAACGGAGATGTGCCAGAGTCCCTAAAAAACCGCCAGTTGATTTCCCTGGATATGGGTAGTTTAAT CGCAGGAGCCAAATATAGGGGGGAATTTGAAGAAAGACTGCGATCGGTATTGCGGGAAGTAACCCACTCTGACGGTCAAA TAGTCCTATTTATTGACGAACTCCATACCGTGGTGGGGGCCGGAGCCGGTTCTGGAGGTTCGGGAATGGATGCCGGAAAC CTGCTTAAACCTATGTTAGCCCGGGGAGAATTGCGCTGTATCGGTGCTTCTACCGTTGATGAATACCGTAAGCATATCGA AAAAGACCCAGCCCTAGAAAGGCGATTTCAACAGGTCTATGTTGATCAACCTAGTCCAGAGAATACAGTATCAATTCTGC GGGGGTTGAAAGACCGTTACGAACGCCATCACGGGGTCAAAATTACGGATTCGGCATTGGTGGCGGCGGCTATGCTGTCA GCCCGATATATTAGCGATCGCTTCCTTCCTGATAAGGCGATCGACCTAGTAGACGAAGCCGCCGCCCAGTTGAAAATGGA AATCACCTCCAAACCCGTAGAGTTAGAACAAATTGAGCGCCGCCTCATGCAGTTGGAGATGGAAAAACTCTCCGTGGAGG GGGAAAGCCCAAGAAGTACACCTCTACGGCCAGGGGAACAAGATCGAAGTGCTGATATCGGTTTAAATCTGCGTATCCAA TCCTTACTCGAAGAAATTAACACCCTCAAAGACAAGCAGAAAACTTTATCATCCCAGTGGCAGGGTGAAAAGGAACTCCT CGAAGCTATTAACCGCCTCAAAGAAGAAGAAGAAAAACTGCGGGTGCAAATTGAACAAGCCGAACGTGCCTATGATCTCA ATAAAGCAGCCCAGTTAAAATACGGCCGCTTAGAGACCGTTCACCACGACCGAGAGGCGCGGGAGGCAGAATTGTTAAAA TTGCAGGCTCAGGGGTCTTCCTTGCTGCGAGAGCAGGTAACAGAAGCCGATATTGCTGCCATTGTCGCTAAATGGACGGG GATTCCCGTTAATCGCCTGTTGGAGTCCGAACGACAAAAATTATTGCAATTGGAATCCCATTTACATCGCCGGGTAATTG GTCAGCAGCAAGCCGTGGAGGCTGTATCTGCCGCTATCCGCCGCGCTAGGGCGGGGATGAAAGACCCCGGACGGCCTATC GGTTCGTTTCTGTTTATGGGACCCACAGGGGTGGGTAAAACTGAGTTGGCTAGGGCTTTGGCGGAGTTCCTCTTTGACAG CGAGGAAGCTATGATTCGCATTGATATGTCGGAATATATGGAAAAACACGCTGTCTCTCGGTTGGTGGGTGCGCCTCCGG GATATGTGGGCTATGACGAAGGCGGACAACTATCAGAAGCGGTCCGCCGCCATCCCTATTCAGTGATTCTATTTGATGAG GTAGAAAAAGCTCATCCTGATGTCTTTAATATCCTGTTACAAGTTTTGGATGATGGTAGAATTACTGACTCCCAAGGACG GTTGGTCGATTTCCGCAATACTGTCATTGTCATGACTAGCAATATTGGCGGTGAGTATATTCTGGGGGTGGCGGGGGATG ACTCTCGCTATGGGGAAATGTCTGCTTTGGTTATGCAGGCTTTGCGATCGCATTTCCGACCGGAATTTTTGAATCGGGTA GATGAAATTATCCTCTTCCATACCCTCAGTAAAGCTGAATTGCGCGATATTGTCGCCATTCAAATGCAGCGCCTCCAAAG ACTTTTGGCTGATCAAAAAATTGCTCTGGAGTTATCACCTGCTGCTATTGATCATGTGGCTGATGTGGGTTATGATCCTG TTTATGGGGCTAGACCTCTGAAACGGGCGATTCAACGGGAGTTGGAAAATCCGATCGCTAACCTGATTTTAGAGCAGAAG TTTGTCACGGGCGATACTATTGAAATTAACATGAAAGATGGAACACTGACTTTTGATCATCCCTCCAACACGCCAGAAGC CCAATTAAATCAGGGTGAGTTGGCTATGTTACCAGTGGCAGTCAACAACCCAGGTGATGATAATTAA Protein sequence : MQPTDPSKFTDKAWEAIVKSQDVARRFQNQHLEVEHVAIAALEQNGLANNILGRAGFNPEQVQQQLEAFTKRQPRVGTID HLYLGRGLELMLDTAEATRSAWQDRYIAVEHLIIALAEDDRVGRRILGNGNPTRATPGRPGFDRPTNDSKATVREKLEEA IKSMRGSAKVDNQNPENSYDALSKYGRDLTELAKSGKLDPVIGRDEEIRRVVSCLSRRTKNNPVLIGEPGVGKTAIAEGL AQRIVNGDVPESLKNRQLISLDMGSLIAGAKYRGEFEERLRSVLREVTHSDGQIVLFIDELHTVVGAGAGSGGSGMDAGN LLKPMLARGELRCIGASTVDEYRKHIEKDPALERRFQQVYVDQPSPENTVSILRGLKDRYERHHGVKITDSALVAAAMLS ARYISDRFLPDKAIDLVDEAAAQLKMEITSKPVELEQIERRLMQLEMEKLSVEGESPRSTPLRPGEQDRSADIGLNLRIQ SLLEEINTLKDKQKTLSSQWQGEKELLEAINRLKEEEEKLRVQIEQAERAYDLNKAAQLKYGRLETVHHDREAREAELLK LQAQGSSLLREQVTEADIAAIVAKWTGIPVNRLLESERQKLLQLESHLHRRVIGQQQAVEAVSAAIRRARAGMKDPGRPI GSFLFMGPTGVGKTELARALAEFLFDSEEAMIRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLSEAVRRHPYSVILFDE VEKAHPDVFNILLQVLDDGRITDSQGRLVDFRNTVIVMTSNIGGEYILGVAGDDSRYGEMSALVMQALRSHFRPEFLNRV DEIILFHTLSKAELRDIVAIQMQRLQRLLADQKIALELSPAAIDHVADVGYDPVYGARPLKRAIQRELENPIANLILEQK FVTGDTIEINMKDGTLTFDHPSNTPEAQLNQGELAMLPVAVNNPGDDN |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-101 | 41 |
aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-99 | 41 |
aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-99 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
clpB2 | YP_005069293.1 | ClpB protein | VFG2084 | Protein | 1e-107 | 42 |
clpB2 | YP_005069293.1 | ClpB protein | VFG2076 | Protein | 1e-118 | 42 |