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Name : clpC (NIES39_D01830) Accession : YP_005068141.1 Strain : Arthrospira platensis NIES-39 Genome accession: NC_016640 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : - COG ID : - EC number : - Position : 1791207 - 1793681 bp Length : 2475 bp Strand : - Note : - DNA sequence : ATGTTTGAATATTTTTCAGATAAAGCGATCAAGGCCGTGATGCTCTCTCAGGAAGAGGCACGACGTTTAGGACATAACTT CGTTGGGACTGAACAACTGCTACTGGGTATTATTGGGGAAGGAACCAGTATCGCCGCCAAGGTACTCTCAGACCAAAACC TAAACTTGGATAATACCCGCCGGGAGATTGAATCTATTATTGGGCGCGGTTCTGGTTTTATGCCACCAGAAATTCCGTTT ACACCTCGCGCTAAGAGGGTGTTTGAGGCGGCGATGAAAGAGGCTAGGCAGTTGGGCAATAATTATATTGCGCCAGAACA TATATTGCTAGGGCTGTTGCAAGATGAAGAAGGTGTAGCAGCCAAGGTTCTGGAAAACTTAGGTATTGAGCGCCGACAAT TACGCACAGAACTGATTAAGAATTTAGGGGAGGAAGTCCCCGCCTCAGCCGGGGGAACCTCCCGCAGTTCGGGGCGCAAA ACGGCTACCCTCGATGAGTTTTCGACTAACTTGACTCAGTTAGCAGCTCAAGGAAAGCTAGATCCTATCGTAGGACGCGA TCGCGAAATAGAACGGGTGATTCAAATACTTGGTCGCCGTACTAAAAACAACCCAGTGCTAATTGGTGAACCGGGGGTTG GTAAAACAGCGATCGCAGAAGGACTGGCTCAACGTATTATTAACGGAAATGTGCCGGAACTTCTGGAAAACCGACAAGTG GTGAGCCTGGAAATGGGAACTCTGGTGGCGGGAACCCGCTTCCGGGGAGAGTTTGAAGAACGACTCAAAAAAATTGTTCA GGAAATTAAAGCCAGTGGCAATATTATCCTATTAATTGATGAGATCCATACCCTGGTGGGAGCGGGAGCTATTGAGGGAA CTATGGATGCTGCTAATATGCTTAAACCGGCTTTAGCACGGGGAGAATTGCAGTGTATCGGCGCAACGACTCTGGATGAA TACCGCAAGTATATTGAGCGTGATGCTGCCTTAGAACGCCGATTTCAGCCGGTAATGGTGGGAGAACCTAGCGTTGAGGA AACTATCGAGATTCTATTTGGGTTGCGGTCGGCTTATGAACAACACCACCGCTTGACTATTTCTGATGAGGCGGTTTTGG CGGCGGCGAAACTATCTCACCGCTATATCAGCGATCGCTTTCTTCCTGATAAGGCGATCGATTTAATTGATGAAGCAGGC TCGCGAGTGAGGGTGATGCACTCTAAGTTACCCCCAGAAGTGCGAGATCTGAAAGTGGAACTGTCGGACATTGTTAAACA AAAAGATGCGGCTGTTCAAGCTCAGGATTTTGAGAAGGCTGGAGAATTGCGCGATCGTGAATTGCAATGCAAAGACCAAA TTGAAGCTGCTTCTCAAGTGGAAACTAGCATCAAAACTAACTTAATTGTTACCGAAGAGGATATCGCTGATGTTCTCTCG GCTTGGACGGGAATTCCGGTCACTAAAATGACTGAATCTGAGTCCTATAAACTGATGCACATGGAAGATACCCTACATCA GCGCCTGATCGGTCAACATGAGGCTGTTAGCGCCGTTTCCCGCGCTATTCGTCGCGCCAGGGTGGGACTGAAAAACCCCA ACCGACCGATCGCCAGCTTTATCTTTTCCGGTCCAACCGGGGTGGGGAAAACCGAACTAACTAAGGCTTTGGCTTATTAC TTTTTTGGTTCCGTGGAAGCGATGATCCGTTTGGATATGTCGGAGTTTATGGAACGCCACACAGTTTCTAAGCTGATTGG TTCCCCTCCCGGTTTTGTTGGCTATGATGAGGGTGGACAACTGACGGAGGCGGTGCGTCGTCGTCCCTATACGGTGATTC TGTTTGACGAAATCGAAAAGGCTCACCCGGATGTCTTTAATATGCTATTGCAGATTTTGGAGGATGGACGACTTACTGAT GCTAAAGGTCGCACTGTCAGTTTCAAAAATACTCTGATTATCATGACCTCGAATATCGGATCGAAGGTGATTGAAAAGGG TGGCGGCGGTCTCGGTTTTGAGTTTGAGGAATCACCGGAAGATGCTCAATATACTCGAATTCGCAATTTGGTTAATGAGG AGTTGAAACAGTATTTCCGACCGGAGTTTATTAACCGTCTTGATGAGATTATTGTCTTCCGTAAGTTGACGAAAGATGAG GTTAAACAGATTGCTGATATCCTGTTGGAGGAAGTGTTTGCTCGTTTGCGGGATAAGGAGATTGTCTTGGAAGTGAGCGA TCGCTTTAAAGATCATATTGTTGAGGTGGGATATGATCCTAATTATGGCGCTCGTCCCCTCCGTCGTGCGATTATGAACC TCTTAGAAGATGTCCTGGCGGAAACTATGCTATCGGGTACACTTAAACCAGGTGATCAGGCTTTGGTAGACTTGGATGAT GATGGACAGGTCAAAGTGATCACGGGTGAAGAACGTCTGCGTCGGCTTCCTGAATATGCCACCACTAACGGCTAA Protein sequence : MFEYFSDKAIKAVMLSQEEARRLGHNFVGTEQLLLGIIGEGTSIAAKVLSDQNLNLDNTRREIESIIGRGSGFMPPEIPF TPRAKRVFEAAMKEARQLGNNYIAPEHILLGLLQDEEGVAAKVLENLGIERRQLRTELIKNLGEEVPASAGGTSRSSGRK TATLDEFSTNLTQLAAQGKLDPIVGRDREIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGNVPELLENRQV VSLEMGTLVAGTRFRGEFEERLKKIVQEIKASGNIILLIDEIHTLVGAGAIEGTMDAANMLKPALARGELQCIGATTLDE YRKYIERDAALERRFQPVMVGEPSVEETIEILFGLRSAYEQHHRLTISDEAVLAAAKLSHRYISDRFLPDKAIDLIDEAG SRVRVMHSKLPPEVRDLKVELSDIVKQKDAAVQAQDFEKAGELRDRELQCKDQIEAASQVETSIKTNLIVTEEDIADVLS AWTGIPVTKMTESESYKLMHMEDTLHQRLIGQHEAVSAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAYY FFGSVEAMIRLDMSEFMERHTVSKLIGSPPGFVGYDEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNMLLQILEDGRLTD AKGRTVSFKNTLIIMTSNIGSKVIEKGGGGLGFEFEESPEDAQYTRIRNLVNEELKQYFRPEFINRLDEIIVFRKLTKDE VKQIADILLEEVFARLRDKEIVLEVSDRFKDHIVEVGYDPNYGARPLRRAIMNLLEDVLAETMLSGTLKPGDQALVDLDD DGQVKVITGEERLRRLPEYATTNG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005068141.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 56 |
| clpC | YP_005068141.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 1e-151 | 52 |
