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Name : clpC (NIES39_D00260) Accession : YP_005067984.1 Strain : Arthrospira platensis NIES-39 Genome accession: NC_016640 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : - COG ID : - EC number : - Position : 1609372 - 1611843 bp Length : 2472 bp Strand : + Note : - DNA sequence : ATGTTTGAACGCTTCACAGAAAAAGCCATTAAGGTGATCATGTTAGCCCAGGAGGAAGCACGCCGCCTGGGACATAACTT CGTAGGAACAGAACAGATCCTCCTGGGTCTGATTGGCGAAGGGACTGGCGTAGCAGCCAAAGTCCTGAAATCGATGGGGG TCAACCTCAAAGATGCTCGGATCGAGGTCGAAAAAATCATCGGCCGCGGCTCCGGGTTTGTCGCCGTTGAAATTCCTTTC ACTCCGCGCGCCAAAAGGGTTTTAGAACTCTCCTTAGAAGAGGCTCGTCAACTCGGACATAATTATATCGGGACAGAACA TTTGCTTCTGGGTCTGATCCGAGAAGGAGAAGGAGTAGCCGCTCGTGTCCTGGAAAATTTGGGGGTTGACCTGTCGAAGG TTCGCACCCAGGTAATTCGGATGTTGGGTGAAACCGCCGAAGTCGCCGCCGGGGGCAGTAGTGGTCGCACTAAGACCCCA ACCCTCGATGAGTTTGGCTCGAATTTGACCCAAATGGCCTCCGAGGGCAAACTTGACCCGGTAGTGGGACGACAAAAGGA AATTGAGCGGGTGATCCAAATTTTGGGTCGTCGTACTAAAAATAATCCGGTGCTAATTGGAGAACCCGGTGTCGGTAAAA CCGCGATCGCCGAAGGTCTCGCCCAGCGCATTGCTCAAAATGACATTCCCGATATCCTGGAAGATAAACGAGTTGTTACC CTCGATATCGGCCTCTTGGTGGCTGGTACTAAGTATCGGGGTGAGTTTGAGGAAAGACTCAAAAAGATTATGGATGAAAT CCGCTCTTGCGGTAATGTCATCCTGGTAATTGATGAGGTTCACACCCTCATTGGTGCAGGTGCTGCGGAAGGGGCTATCG ATGCAGCTAATATCCTCAAGCCAGCTTTGGCGCGGGGTGAGTTGCAGTGTATCGGTGCTACTACCCTCGATGAGTACCGC AAGCATATTGAACGGGATGCCGCCCTGGAACGTCGGTTCCAACCCGTGATGGTGGGTGAGCCTTCGGTACCCGAAACCAT TGAGATTCTCTATGGACTGCGGGAACGCTATGAGCAGCACCACAAGCTGAAAATCATTGATGAAGCTATCGAAGCGGCAG CGAAATTGTCCGATCGCTATATTAGCGATCGCTATCTCCCCGATAAGGCGATCGATTTGATTGATGAAGCCGGATCGCGG GTGCGCCTGATTAACTCCCAGCTTCCCCCAGCCGCCAAGGAACTCGACAAGGAATTGCGACAAGTCCTCAAAGAGAAAGA TGACGCGGTGCGCTCCCAGGACTTTGACCGAGCCGGAGAATTGCGCGATCGCGAAATGGAAATTAAGTCCCAAATTCGGG CGATCGCTCAAAACAAAAAATCCGAAACTCGCACCGACGAGGACGATTCCCCCATGGTAACAGAAGAGGATATCGCCCAA ATCGTCGCCAGTTGGACCGGGATTCCCGTTAACAAACTCACCGAGTCCGAGTCCGAGAAACTCCTGCACATGGAAGACAC CCTCCACCAGCGTCTTATTGGTCAGGAAGAGGCTGTCAAAGCCGTTTCTCGCGCTATCCGTCGCGCCCGTGTCGGACTCA AGAACCCCAACCGACCCATCGCTAGTTTCATCTTCTCTGGACCAACAGGGGTAGGTAAAACCGAGTTGACTAAATCCCTC GCCGCCTACTTCTTCGGCTCAGAAGAAGCCATGATCCGCCTGGATATGTCGGAATTTATGGAGCGGCACACCGTTTCTAA ACTCATCGGTTCCCCTCCCGGCTATGTGGGTTACAACGAAGGTGGACAACTCACCGAAGCGGTGCGCCGTCGTCCTTATA CCGTGGTGCTGTTCGACGAAATCGAAAAAGCTCACCCCGATGTCTTCAATATGTTATTGCAGATTTTGGAAGATGGGCGC TTGACCGATGCTAAAGGTCGCACCGTTGACTTTAAAAACACCCTGATCATCATGACTTCCAACATTGGATCTAAGGTGAT CGAAAAAGGTGGCGGCGGTCTTGGGTTCGAGTTTGAAGAAAATCAAGCTGATGCTCAATATAACCGCATTCGCAACCTGG TTAATGAAGAACTCAAGCAATACTTCCGTCCGGAGTTCCTCAACCGTCTGGATGAGATTATCGTCTTCCGTCAACTCAAT AAAGATGAGGTCAAGGAAATCGCGGTAATTATGCTTAACGAGGTGTTCGGTCGCCTGACGGAAAAAGGCATTCGCCTGGA AATTACCGATCGCTTTAAAGAAAGACTGGTAGAAGAAGGTTATAACCCCAGCTACGGTGCGCGTCCCCTGCGTCGCGCCA TTATGCGTTTGCTGGAAGATAGCCTCGCTGAGGAAATCCTCTCTGGTCGCGTCAAAGAAGGCGATACGGCGATCGTTGAT GTCAATGAAGACGGTCAAGTTCAAGTCTTACAAGGCGAGAAACGGGAACTGCTTCCCCAAGCCGCTGACTAA Protein sequence : MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVAAGGSSGRTKTP TLDEFGSNLTQMASEGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIAQNDIPDILEDKRVVT LDIGLLVAGTKYRGEFEERLKKIMDEIRSCGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR KHIERDAALERRFQPVMVGEPSVPETIEILYGLRERYEQHHKLKIIDEAIEAAAKLSDRYISDRYLPDKAIDLIDEAGSR VRLINSQLPPAAKELDKELRQVLKEKDDAVRSQDFDRAGELRDREMEIKSQIRAIAQNKKSETRTDEDDSPMVTEEDIAQ IVASWTGIPVNKLTESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSL AAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGR LTDAKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFEENQADAQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQLN KDEVKEIAVIMLNEVFGRLTEKGIRLEITDRFKERLVEEGYNPSYGARPLRRAIMRLLEDSLAEEILSGRVKEGDTAIVD VNEDGQVQVLQGEKRELLPQAAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005067984.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 60 |
| clpC | YP_005067984.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 1e-150 | 52 |
