Gene Information

Name : smpB (NIES39_B01120)
Accession : YP_005067407.1
Strain : Arthrospira platensis NIES-39
Genome accession: NC_016640
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1017320 - 1017787 bp
Length : 468 bp
Strand : +
Note : -

DNA sequence :
ATGAGTAAAGACAGTAACGGATACAAAATCCTCACCGATAACCGTAAAGCTCGCTATCTGTACGAGATCCTAGATACCTA
CGAAGCCGGAATTGAACTGAAAGGCACGGAGGTTAAGTCGATCCGGGCGGGTCGTTCTAATTTGCAGGATGGTTATGCGT
TGGTGCGGGATGGAGAGGTGTGGCTGATTAATGTTCATATCTCCCCTTATGAGAATACGAGTAATTTCTTTAATCATGAT
CCGCGCCGTACCCGAAAGTTGTTGCTACATCGCCAGGAAATTAATAAGCTGATTGGACAGGTAGAACAAAAGGGCCTGAC
CCTGGTTCCTCTGAGAATGTATCTGAAACGGGGACGGGTTAAGGTGATGATTGGACTGGCGCGAGGTAAGAAGTTGCACG
ACAAGCGAGAGACAATCCGACGCAGGGATGATGCGCGGTCTATGCAACGGGCGCTAAAGCAGTTTTAA

Protein sequence :
MSKDSNGYKILTDNRKARYLYEILDTYEAGIELKGTEVKSIRAGRSNLQDGYALVRDGEVWLINVHISPYENTSNFFNHD
PRRTRKLLLHRQEINKLIGQVEQKGLTLVPLRMYLKRGRVKVMIGLARGKKLHDKRETIRRRDDARSMQRALKQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 2e-32 54
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 4e-33 52
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 8e-27 41