Gene Information

Name : smpB (Rsl_693)
Accession : YP_005065784.1
Strain : Rickettsia slovaca 13-B
Genome accession: NC_016639
Putative virulence/resistance : Unknown
Product : tmRNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 589233 - 589691 bp
Length : 459 bp
Strand : +
Note : -

DNA sequence :
ATGACTGAATATAAGAAAGTTATTGCACAAAATAAGAAAGCCCTTTTTAATTATTTTATTGAAGAAAGATTAGAAGCGGG
TATTGTATTAAAGGGTAGTGAAGTACGGTCTCTGCGTCAAGGCAAAGCTTCTATAGAAGAAAGTCATGCGGCAGATACCG
GACATGAGGTATTTTTGTATAACTGCCATATTGCAGAATATGAAAAAGCGAATAGATTTAATCATGCTACTCGTAGACCG
CGTAAATTATTGTTGCATACTAAAGAGATAAAGAAAATTATCGGTAGAATTAGAATAAAAGGCTATACGCTAGTAGCTCT
TTCTATGTATTTTAATAAAAAAAATAAAGTGAAAGTTGAACTGGGTATTGCTAAAGGTAAGAAATTACATGATAAAAGAG
AGTCAATTAAAGAAAAAGACTGGAAAAGAGATCAGAGCAGATTAATAAGACAGAAGTAA

Protein sequence :
MTEYKKVIAQNKKALFNYFIEERLEAGIVLKGSEVRSLRQGKASIEESHAADTGHEVFLYNCHIAEYEKANRFNHATRRP
RKLLLHTKEIKKIIGRIRIKGYTLVALSMYFNKKNKVKVELGIAKGKKLHDKRESIKEKDWKRDQSRLIRQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 2e-23 48
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 5e-20 47
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 1e-18 46