Gene Information

Name : SpiGrapes_0620 (SpiGrapes_0620)
Accession : YP_005061472.1
Strain : Sphaerochaeta pleomorpha Grapes
Genome accession: NC_016633
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 676642 - 677340 bp
Length : 699 bp
Strand : -
Note : PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase

DNA sequence :
ATGTTGGAATCCTTGAAAAAAACCGTATTTGAGGCAAACCTTGCATTGCCAAAGTATAACCTTGTGACTTTTACCTGGGG
AAATGTATCAGGAATCGACAGGGAGCAAAACCTTGTGGTTATTAAACCCTCCGGGGTTTCCTATGAGCAGATGAGCTATG
AGGATATGGTAGTTGTAGATCTTGTTTCAGGGCGTACCGTCGAGGGAACGCTTAAGAGTTCCTCGGATACCCCTACACAC
TTGGAACTTTACCGTAATTTCCCTTCCATTGGCGGCATCGTGCACACGCATAGCCGCTGGGCGACCATATTTGCCCAGAC
GGGTAAATCTATCCCTGCCTTGGGGACTACCCATGGCGACTATTTCTATGGGACCATCCCCTGCACCCGTATGATGACCG
ACGAAGAGATCGGCGGCGACTATGAGAAGGAAACAGGGACGGTTATCGTTGAAACCTTCCATTCTCGTGATCCTCAACAG
GTTCCCGCGGTATTGGTACATAGCCATGGCCCCTTTGCCTGGGGGAAGGATCCTTTGGATGCGGTGCACAACGCTGTGGT
CCTTGAAGAAGTTGCCATGATGGCCTGGCATGGCATGGTACTCTGCAAGGAGGGTATCGATCCGATGCAACCTGCTTTGC
TGGATAAGCATTATCTGCGCAAGCATGGAAAGAATGCCTATTACGGACAAAAATCTTAG

Protein sequence :
MLESLKKTVFEANLALPKYNLVTFTWGNVSGIDREQNLVVIKPSGVSYEQMSYEDMVVVDLVSGRTVEGTLKSSSDTPTH
LELYRNFPSIGGIVHTHSRWATIFAQTGKSIPALGTTHGDYFYGTIPCTRMMTDEEIGGDYEKETGTVIVETFHSRDPQQ
VPAVLVHSHGPFAWGKDPLDAVHNAVVLEEVAMMAWHGMVLCKEGIDPMQPALLDKHYLRKHGKNAYYGQKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 5e-55 54