Gene Information

Name : SpiGrapes_2854 (SpiGrapes_2854)
Accession : YP_005063617.1
Strain : Sphaerochaeta pleomorpha Grapes
Genome accession: NC_016633
Putative virulence/resistance : Unknown
Product : DNA polymerase I family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3112861 - 3114801 bp
Length : 1941 bp
Strand : -
Note : PFAM: DNA polymerase family A

DNA sequence :
ATGAAATACCTTAGCATCGATATCGAGACGTATTCCTCTATCAATCTGGCCAAGAGCGGAGTTTACCGCTACTGCGAAGC
AGAGGACTTCGAGATCCTCCTGTTCGGTTACAGCTTGGACGGCGGGGAGGTGAAAGTCGTCGATCTCGCCCGGGGGGAGA
AAATCCCCAAGAACATCGTCAGAGCTATCTCCGACGATGGCATCATCAAATGGGCGTTCAATGCAACCTTCGAACGCATT
TGTCTTTCCCGCCATCTAGGACTGCCGACAGGGACCTATCTCGATCCGTCCTCCTGGCGTTGCACGATGATCTGGTCGGC
GTATCTGGGCCTACCCCTATCGCTGATGGGCGTCGGTGCCGTGCTCGGTCTTCAGAGACAGAAGCTCTCCGAGGGCAAGG
ACCTGGTCAGATACTTCTGCACCCCATGCAATCCTACAATCACCAACGGCGGGCGTACCAGAAATGAGGCTGATGATGCA
CCTGACAAATGGAAACTGTTCATCGAGTACAACAAGCGCGATGTCGAGGTTGAGATTGCCATCCATCAGCGCCTCTATCG
ACTTCCGGTTCCCGATGCAATCTGGGATGAGTACCTCCTTGATCAAGGCATCAACGACCGGGGTGTGTTGGTCGACAAGA
ATCTCGTGGATAACGCAATCAGGATGGACAAGCGTGCCCGAGAAGAGTTGATTACGAGGATGAAGGATCTCACTGATTTG
GAGAATCCCAACTCAGTGCCACAGGTAAAAACCTGGCTGTCAGAGAACGGTCTTGAAGTCGATTCTCTTGGCAAGAAGGA
TGTGATGACAGCTTTGCAGGACGCCCCGCCCCAGATCCAAGAAGTACTCGAGCTCAGGCTTCAGCTTGCCAAGTCGTCGG
TGAAGAAGTACCAGGCGATGGAAAACGCAGTTTGCAGCGATGGCAGGGCAAGGGGCATGTTCCAGTTCTACGGGGCAAAC
CGAACCGGGCGGTGGGCTGGAAGACTCGTGCAAATGCAAAATCTACCCCAGAACCATCTGGAGGATTTGGAGACTGCAAG
AACCTTGGTTACGAGCGGTGGGTATGAAGCAGTGCAGATACTGTATTCCGATGTTCCCAACACCTTGTCACAGTTGGTCC
GTACCGCATTCATTCCTAGAAGCGGATATCGGTTCATTGTTTCGGACTTCTCTGCAATTGAAGCAAGAGTACTCTCCTGG
CTCGCTGGGGAGACTTGGCGTATGGAGATCTTTGCCGAGAACGGGGATATCTACTGTGCATCCGCTTCTCAGATGTTCAA
GGTCCCTGTAGAGAAGCATGGTCAGAATGCCCATCTAAGACAGAAAGGGAAAATTGCCGAATTGGCACTTGGTTACGGCG
GGTCGGTGGGGGCTCTGAAGGCGATGGGTGCTCTGGATATGGGCCTTGAAGAGGATGAGCTCAAGCCCTTGGTGGATGTG
TGGCGTCAATCCAATCCTAACATCGTCCAGCTTTGGTGGGATGTGGACAAGGTGGTTAAGGAAGCGGTGAGGGGAAAAAC
CACAACCAACACGCATGACATCAATTTCTCACATGAGAGTGGCTTCTTGTTCATTACGTTGCCATCGGGAAGACGGCTTG
CCTACGTGAAACCCCGTATGGGAACCAATGATTTTGGTAACGATTGCGTAACGTATGAGGGCGTGGGAGCCACGAAGAAG
TGGGAACGTATCGAAACATATGGTCCCAAGGTGGTGGAGAACATCGTTCAGGCAATCAGCCGTGACATTCTCTGCTACTC
GATGCAGCAACTCAAGGATCATCGGATCTGCATGCACATCCATGACGAGATCGTCATCGAGGCACCTGATGAAATGGAAT
TGGAAACCATCGAGGCTTCCATGGCGGCATCGCCATCATGGGCAGATGGATTGTTGCTCAATGCGGATGGCTTTGAGACC
AAATTTTACAAGAAGGACTGA

Protein sequence :
MKYLSIDIETYSSINLAKSGVYRYCEAEDFEILLFGYSLDGGEVKVVDLARGEKIPKNIVRAISDDGIIKWAFNATFERI
CLSRHLGLPTGTYLDPSSWRCTMIWSAYLGLPLSLMGVGAVLGLQRQKLSEGKDLVRYFCTPCNPTITNGGRTRNEADDA
PDKWKLFIEYNKRDVEVEIAIHQRLYRLPVPDAIWDEYLLDQGINDRGVLVDKNLVDNAIRMDKRAREELITRMKDLTDL
ENPNSVPQVKTWLSENGLEVDSLGKKDVMTALQDAPPQIQEVLELRLQLAKSSVKKYQAMENAVCSDGRARGMFQFYGAN
RTGRWAGRLVQMQNLPQNHLEDLETARTLVTSGGYEAVQILYSDVPNTLSQLVRTAFIPRSGYRFIVSDFSAIEARVLSW
LAGETWRMEIFAENGDIYCASASQMFKVPVEKHGQNAHLRQKGKIAELALGYGGSVGALKAMGALDMGLEEDELKPLVDV
WRQSNPNIVQLWWDVDKVVKEAVRGKTTTNTHDINFSHESGFLFITLPSGRRLAYVKPRMGTNDFGNDCVTYEGVGATKK
WERIETYGPKVVENIVQAISRDILCYSMQQLKDHRICMHIHDEIVIEAPDEMELETIEASMAASPSWADGLLLNADGFET
KFYKKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2073 YP_002747288.1 phage DNA polymerase Not tested ¥ÕSeq4 Protein 3e-156 52
polA YP_494120.1 phage related DNA polymerase family A Not tested ¥ÕSa2 Protein 1e-148 49
MW1425 NP_646242.1 DNA polymerase Not tested ¥ÕSa2 Protein 4e-150 48