Gene Information

Name : SpiGrapes_2846 (SpiGrapes_2846)
Accession : YP_005063611.1
Strain : Sphaerochaeta pleomorpha Grapes
Genome accession: NC_016633
Putative virulence/resistance : Unknown
Product : DNA/RNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3104760 - 3106133 bp
Length : 1374 bp
Strand : -
Note : PFAM: SNF2 family N-terminal domain

DNA sequence :
ATGACATATACACCGCATGACTACCAACAGTATGCGAGCGACTTCATAGAGGAGCACCCCGTGGCAGCGGTATTACTGCA
GATGGGACTTGGCAAAACGGTCATCACCCTGACGGCCCTTTCCAATCTCCTCTTCGATTCATTCCTGGTGCGCAAGGTAC
TGATCATCGCGCCTCTTCGGGTTGCCAGGGATACGTGGCCTGCCGAAATCGGCAAGTGGGATCACCTTGGGGATTTGATT
CCGTCAGTGGCCGTGGGAAGTACCGCCGAGCGAATTACAGCACTCGAGCGCAAGGCTGACCTGTACATCATCAATCGCGA
GAACGTGCAGTGGCTCATCGAAGAAAGCGCCCTGCCCTTCGACTTCGACATGGTGGTCGTCGACGAGCTCTCATCGTTCA
AGAACCACCGCTCCAAGCGCTTCAGAGCGCTGATGAAGCGCCGTCCTGTGGTAAAACGCATCGTTGGCCTGACCGGTACC
CCGGCCAGCAACGGCCTGATCGACCTTTGGGCCCAGTTCAAGATTCTGGACAAGGGTGTGAGACTCGGAAGGTTCATCGG
AGCCTATCGTAATGCGTATTTCACCCCAGACAAGAGAAGCGGACAGGTGGTGTTCAGCTATAAACCCGCCCCCGGTGCGG
AGGAAAGGATCTACCAAGCGATCGAGGACATCACCATCTCCATGAAGGCCCAGGACCATATCAGGATGCCCGAGCTCGTG
ACCAATGAATATAAGATTTCCCTCAGCGGCGATGAGCGGATGGCCTATGAAAGACTACGGAAAGATCTGGTGCTCGACGC
CTCCGGAGGACAGGTGACAGCAGCCAATGCGGCAAGCCTGTCGGGCAAGCTGCTGCAGCTGGCAAATGGGGCTGTGTACA
CCGACGACGGGAAGACCATTGCCCTTCACGATCGCAAGCTCGATGCGCTTGAGGACCTCATTGAGGCGGCCAACGGAAAA
AGTGTGCTGGTGGCCTATTGGTTCAAGCACGACCTTCAGCGGATTGCGGGGAGGCTGGAGAAGCTGGGGGTATCGTTTTC
GACTCTGGATTCGAGTGAAAGCCTTTTGAAATGGAACCAGGGAAAACTGCAGGCCGCTCTGATACACCCAGCCTCCGCCG
GGCACGGATTGAATCTCCAAGGCGGGGGGAGCTTCCTGATCTGGTTCGGCCTTACCTGGAGCCTCGAACTCTACCAGCAG
ACGGTAGCGCGCCTGTGGCGCCAAGGCCAGAAGTCCGAGACGGTGGTGGTCCAACATCTCATCACCGAGAAGACCATCGA
TGAGCGCATCATAAAGGTTCTTTCAGGTAAGGCACTAACCCAGAATGCTCTGATCGAGGCGGTGAAGGCCGAACTTACAG
GGGGTAGCCGATGA

Protein sequence :
MTYTPHDYQQYASDFIEEHPVAAVLLQMGLGKTVITLTALSNLLFDSFLVRKVLIIAPLRVARDTWPAEIGKWDHLGDLI
PSVAVGSTAERITALERKADLYIINRENVQWLIEESALPFDFDMVVVDELSSFKNHRSKRFRALMKRRPVVKRIVGLTGT
PASNGLIDLWAQFKILDKGVRLGRFIGAYRNAYFTPDKRSGQVVFSYKPAPGAEERIYQAIEDITISMKAQDHIRMPELV
TNEYKISLSGDERMAYERLRKDLVLDASGGQVTAANAASLSGKLLQLANGAVYTDDGKTIALHDRKLDALEDLIEAANGK
SVLVAYWFKHDLQRIAGRLEKLGVSFSTLDSSESLLKWNQGKLQAALIHPASAGHGLNLQGGGSFLIWFGLTWSLELYQQ
TVARLWRQGQKSETVVVQHLITEKTIDERIIKVLSGKALTQNALIEAVKAELTGGSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2070 YP_002747285.1 SNF2 family phage protein Not tested ¥ÕSeq4 Protein 1e-94 51
SH1779 YP_253694.1 hypothetical protein Not tested ¥ÕSh1 Protein 1e-99 50
SAUSA300_1408 YP_494105.1 phage helicase Not tested ¥ÕSa2 Protein 5e-97 49
MW1405 NP_646222.1 hypothetical protein Not tested ¥ÕSa2 Protein 5e-102 48
SAOV_0314 YP_005735831.1 putative DNA helicase Not tested ¥ÕSa1 Protein 3e-103 48