|
Name : SpiGrapes_2647 (SpiGrapes_2647) Accession : YP_005063417.1 Strain : Sphaerochaeta pleomorpha Grapes Genome accession: NC_016633 Putative virulence/resistance : Virulence Product : TRAP transporter subunit DctM Function : - COG functional category : - COG ID : - EC number : - Position : 2903914 - 2905203 bp Length : 1290 bp Strand : + Note : PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit DNA sequence : ATGAGTTTTCCCCTATTTATCACCTTATTCGTATTTGTTCTCATTTTCCTATTGAGAATGCCTATTGCCTTTGGCATGTT GGCCTCTGCCGCCTGTTATCTGTTAGTGAAAGGTGGGGATTTGAGCCTGGTAATCAATCAGGTTATGAATACCTATTACA CAAACTATGTAATCATCGCTGTTCCTCTCTTTATATTCACTGCGAATATAATGAACTCGGGGAAAGTCACCGATATGATT TTCAATTTTGCCGGTGGCCTCTGTGGCCGGATGAGAGGTTCTCTCGGACAGGTAAATGTCATTGCTTCCCTCATTTTCTC GGGAATGACAGGATCGGCGATAGCTGATGCCGCAGGCCTTGGGAAAATCGAGATTGCTGCAATGAAAGACCAAGGCTACG ATGCTGAGTTTGCCTGTGCCATAACTGCAGCCTCGGCGACAATCGGTCCCATTTTCCCTCCTTCGATTCCCCTGGTTATC TATGCGATGCTGTCAAGCACTTCTGTCGGGGCATTGTTTATGGGAGGTATGATTCCTGCCATTCTCCTTACAGGTTTTCT TATGATATATGTTGCCCTCGTGGCGAGGAAAAGAGATTATCCCCGCGGAGCCAAGATAGTCTGGAGCGTATTCTTGAAGG CCACCTTCAGGGCAATCCTTGGATTGCTTACCCCGGTGATTTTGCTTGTGGGAATCTATACGGGTATCATGACTCCTACC GAGGCCGGTGCCATAGCAGGTTTCTATGCTCTGATTATTTCTGTCTTTGCCTACAAGGCAATCGGCTGGAAGGAATTTTT TGCAGTCTTGAAACTTTCTGTGAGGGATATCGGGGCAACCAGCATCATGATCGGTGCAGCTACTATTATCAGTTATATCG TAGCAAGGGAGCAGTTGGCTCTCAATATCGGTAACTGGATTTTAAGTATTACCTCCGGAAAGTATGGATTCTTGTTCCTT GTGAATGTGGTTATCCTCATCCTCGGGATGTTTATGGATACTTCTACGATTCAGCTGGTATTTGTTCCTATCATGATTCC CGTTGCCAGGGCTTTGGGTATCGACATGGTGCATTTTGGCTTGGTCGTAACGTTTAACATGATGGTAGGGCTTTCAACAC CTCCGTTTGGAATGTTGCTGTTCATTACTTCAGGGATATCGGGCACTCCGCTCAAAGGAGTCATGAAAGAAATCATCTGG CCTTTGGTGGCAATGATATTGGTTCTGATAATAATTACCTATTTCCCGGAAGTCACGTTGTTCCTTCCGAGAGCTGCTGG TCTGATTTAA Protein sequence : MSFPLFITLFVFVLIFLLRMPIAFGMLASAACYLLVKGGDLSLVINQVMNTYYTNYVIIAVPLFIFTANIMNSGKVTDMI FNFAGGLCGRMRGSLGQVNVIASLIFSGMTGSAIADAAGLGKIEIAAMKDQGYDAEFACAITAASATIGPIFPPSIPLVI YAMLSSTSVGALFMGGMIPAILLTGFLMIYVALVARKRDYPRGAKIVWSVFLKATFRAILGLLTPVILLVGIYTGIMTPT EAGAIAGFYALIISVFAYKAIGWKEFFAVLKLSVRDIGATSIMIGAATIISYIVAREQLALNIGNWILSITSGKYGFLFL VNVVILILGMFMDTSTIQLVFVPIMIPVARALGIDMVHFGLVVTFNMMVGLSTPPFGMLLFITSGISGTPLKGVMKEIIW PLVAMILVLIIITYFPEVTLFLPRAAGLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 2e-63 | 41 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 2e-63 | 41 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 1e-63 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SpiGrapes_2647 | YP_005063417.1 | TRAP transporter subunit DctM | VFG1110 | Protein | 7e-64 | 41 |
