Gene Information

Name : SpiGrapes_2109 (SpiGrapes_2109)
Accession : YP_005062897.1
Strain : Sphaerochaeta pleomorpha Grapes
Genome accession: NC_016633
Putative virulence/resistance : Unknown
Product : ABC-type metal ion transport system, periplasmic component/surface antigen
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2317132 - 2317941 bp
Length : 810 bp
Strand : +
Note : PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family

DNA sequence :
ATGAAAAAAGTTTCAGCTATTGTTTTAGTTCTTCTTGTTTCGATCACCGTTGCTTTTGCAGCTGGTGCAAAGGAACAGTC
TTCTGCTAAAGTTCTGACTGTCGGGGCGACTCCGGAACCCCATGCCGCATTCCTCAGTTTGGTTGTAGAAGACCTTGCTG
CGCAGGGTATTACCCTCAAGGTCAAAGAATTTACCGACTATGTAACTCCCAATGAGGCATTGGAGTCAGGTGAGCTCGAT
GCAAATTTCTTCCAGCATGTTCCTTACTTGGAATCATTCAACAGAGAACGCGGTTATCATCTTGCAAATGCCGGTGGTAT
CCATGTGGAACCCTTCGCACTTTACTCAAACGAGTATAAAAGTGTTGCGGATCTTCCAAACGGTGCGACAATTGCAATAC
CTAACGACCCCACCAACGAGGGGCGTGCCCTTTTGTTATTGCAGAGTGCTGGGTTGCTGACCCTTGATGCTAATGCAGGT
CTTGAAGCTACTCCTCTGGATATCGCCAAGAATCCCAAGGGTTTGAAGTTCCATGAGATTGAACCTGCTTCCCTTCCCCG
GGTACTCCAGGATGTGGATGGGGCAATCATCAACGGTAACTATGCCATTCCTGCTGGATTGATTGCAACCCGTGACGGTT
TGTTCGTAGAGGGTGCTGATAGCCCGTACGTAAATGTAGTGGCGGTCAAAGAAGGCAACCAGAATGACGAACGGATCGTA
GCTTTGGTGCAGGCCCTTCGTGGACAGAAGGTACGTGACTATGTAGCCTCACACTATCCCAATGGTGAAGTTGTTCTTGT
ATCCAAATAA

Protein sequence :
MKKVSAIVLVLLVSITVAFAAGAKEQSSAKVLTVGATPEPHAAFLSLVVEDLAAQGITLKVKEFTDYVTPNEALESGELD
ANFFQHVPYLESFNRERGYHLANAGGIHVEPFALYSNEYKSVADLPNGATIAIPNDPTNEGRALLLLQSAGLLTLDANAG
LEATPLDIAKNPKGLKFHEIEPASLPRVLQDVDGAIINGNYAIPAGLIATRDGLFVEGADSPYVNVVAVKEGNQNDERIV
ALVQALRGQKVRDYVASHYPNGEVVLVSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nlpA AAW51766.1 NlpA Not tested AGI-3 Protein 5e-29 45
SAAV_0786 YP_003281709.1 ABC transporter substrate-binding protein Not tested SaPIAv Protein 3e-41 42