Gene Information

Name : SpiGrapes_1668 (SpiGrapes_1668)
Accession : YP_005062481.1
Strain : Sphaerochaeta pleomorpha Grapes
Genome accession: NC_016633
Putative virulence/resistance : Virulence
Product : putative nucleoside-diphosphate sugar epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1816457 - 1818271 bp
Length : 1815 bp
Strand : -
Note : PFAM: Polysaccharide biosynthesis protein

DNA sequence :
ATGAGAAAACGCAGGATGCGGCAAGTTTCGCTTATGGCGATCGACGCCTTTTTGCTGGTCTTTTGTGGGTTTCTCTCTTC
GTGGATAGTATTGCATGCTATGCCGGAATTGCTGTACAGGGTTGTCCTGGCCAATGGTGTGTCAGTACTTTTGCTGCTCT
TTGTTGTCCGGTTCTACAAGATCCGGGTCAGTGAGAGTTCGCTTGACCTGCTCAGCCGTGGGCTTTTGGGTTTTGTCCCG
GTGTTCGTCCTCGGCATTCTGTTAGTTGCCCTCCTCGATTCCTTTTCCTCAATTTGGATTCCGTTCCTCATTGTGATGGA
CTGGTCCTCTTTTCTGTGCATCATGGGTATCAGGGTGGTTTACCGGAGTTTTCTCAACCGAAAGAATATTATCCATGCCA
ATGGTTTGCCAAAGGCTGTCGTATATGGGGCCGGGGAGCTCGGCTCGACAATCGTGCGCCAGTTCCAGAAGGGGAACATT
CCCTTCCATATCGTAGGGTTCGTCGACGACGACCCTGCAATTCTTGGAACCTACATCGTGGGGACAAGGGTACTCGGGAC
CACCGAGGCCTTGGGCGAGGTGTTGGTTGAGACCCAGGCAAAGGTCTTGATCATTGCCATATCCAATATTGACCAGGAAC
ATATGTTCAAGGCCGTGGACGCTGCCAAGGAACATGGTTGCGACGTGAAGGTCATTCCAAGCCTGTTCGAGGTTCAGCAG
GGGGCCAAGGAGCTCGATCTGCGTAACCTCGACTATCCAGACCTTTTGGGCCGTCCCCTTACCTTCATAGACAAGAAGCC
GATTGCCGATATGGTGAAGGGCAAGCGGGTACTGGTAACAGGCTCGGGCGGAAGCATTGGCAGCGAGATCTGCCGCCAGC
TCCTTACCTATGAACCTGCGCAGCTGGTTCTGCTCGATATCGATGAGACTGAACTGCATGACCTCTCACTGAGGCTGCAC
AACTACCAGAAAGAATGGAGTGATTTGATCGTCCCTGTTGTCTGCGACATCAAGAACGCTAGGAAGATCAACCAGATATA
TGAGAAGTTCCAGCCGCAGCTGGTCTTCCACGCTGCTGCCTACAAGCATGTTCCTTTACAGGAGCTCTATCCCGAGGAAG
CCATCACCACCAACATCGGCGGTTCCTACAATGTGCTCAAGGGCGCAGTCGACCACAAGGTCGAGCGGGTAGTGGTTATT
TCCACCGACAAGGCAGTGAACCCGACCAACGTCATGGGGGCCACCAAGCGCGTGGTCGAGATGCTGGCGAGCATGCTGAC
CAATGAAGAGACCGAAATGGTCTGTGTCCGCTTTGGCAACGTCCTGGGAAGCCGCGGGAGCATGCTCCCCCTCTTCATGG
ACCAGATCAAGGCCGGCGTACCGATAACAGTGACCCATAAGGATATCATTAGGTACTTCATGGCCATCCCCGAGGCCGTA
GGCCTCGTCTTCAAAGCCGCCTCGATGGCCAAGGGCGGGGAGGTTATGGTCCTGGACATGGGTCAACCGGTAAGGATCTA
TGACTTTGCCCAGAAACTGGTCAAGTACTATGGCGACGGAAGAAGCCAGGTGATTATCACGGGCCTACGACCCGGTGAGA
AGCTCTACGAGGAGCTTCTGGCCAACAAGGACGAGACCATCCCCACAGAAGACAAGCTGGTCTTCAAGGCGAAGCTCGAG
AACCATGTCTTGAAACCCGAGATGTTCCAGCCTATCTATGACACGCTCAACACGGCAACCACCGAAGGTCTATTACAAGA
ACTCCAGCAACTGGTTCCCGAGTTCAAGTACCAACACAGTACGTTTGTGCTGTAA

Protein sequence :
MRKRRMRQVSLMAIDAFLLVFCGFLSSWIVLHAMPELLYRVVLANGVSVLLLLFVVRFYKIRVSESSLDLLSRGLLGFVP
VFVLGILLVALLDSFSSIWIPFLIVMDWSSFLCIMGIRVVYRSFLNRKNIIHANGLPKAVVYGAGELGSTIVRQFQKGNI
PFHIVGFVDDDPAILGTYIVGTRVLGTTEALGEVLVETQAKVLIIAISNIDQEHMFKAVDAAKEHGCDVKVIPSLFEVQQ
GAKELDLRNLDYPDLLGRPLTFIDKKPIADMVKGKRVLVTGSGGSIGSEICRQLLTYEPAQLVLLDIDETELHDLSLRLH
NYQKEWSDLIVPVVCDIKNARKINQIYEKFQPQLVFHAAAYKHVPLQELYPEEAITTNIGGSYNVLKGAVDHKVERVVVI
STDKAVNPTNVMGATKRVVEMLASMLTNEETEMVCVRFGNVLGSRGSMLPLFMDQIKAGVPITVTHKDIIRYFMAIPEAV
GLVFKAASMAKGGEVMVLDMGQPVRIYDFAQKLVKYYGDGRSQVIITGLRPGEKLYEELLANKDETIPTEDKLVFKAKLE
NHVLKPEMFQPIYDTLNTATTEGLLQELQQLVPEFKYQHSTFVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-63 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SpiGrapes_1668 YP_005062481.1 putative nucleoside-diphosphate sugar epimerase VFG1300 Protein 6e-63 42