Gene Information

Name : SpiGrapes_1642 (SpiGrapes_1642)
Accession : YP_005062459.1
Strain : Sphaerochaeta pleomorpha Grapes
Genome accession: NC_016633
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1792125 - 1792466 bp
Length : 342 bp
Strand : -
Note : PFAM: IS66 Orf2 like protein

DNA sequence :
ATGGAGTTTAGCATACGCAACTGCTATCTACGACCAGGATTCACGGATCTAAGAAATGGCATGAACGGCCTGATGCGGGT
TGCCATGAGCGAAATGGAACTGGACCCGCTTGGAGGGGACTTGTTCCTGTTCTGCGGAAGGGACCGCCATACTGTCAAGA
TGCTGTGGTGGTCAGGTGACGGTTTCTGGCTCCTGCAGAAGCGTCTGAACAACCTGACCTTTGCCTGGCCGAAGTCAGGG
CTTGAGGCTTTGGAAATCAGCGAAACACAGCTGAGCATGCTCCTTCAGGGTATAGATTTCTGGCGGTCGCACCCGGTCCT
GCTGGCCGAGAAGACCTGCTGA

Protein sequence :
MEFSIRNCYLRPGFTDLRNGMNGLMRVAMSEMELDPLGGDLFLFCGRDRHTVKMLWWSGDGFWLLQKRLNNLTFAWPKSG
LEALEISETQLSMLLQGIDFWRSHPVLLAEKTC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 9e-14 45
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 5e-14 45
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 5e-14 45
unnamed AAC31493.1 L0014 Not tested LEE Protein 4e-14 45
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-14 45
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 4e-14 45
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 5e-14 45
unnamed AAL99258.1 unknown Not tested LEE Protein 4e-14 45
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 5e-14 45
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 4e-14 45
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 5e-14 45
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 9e-14 45
unnamed AAL08461.1 unknown Not tested SRL Protein 7e-14 44
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 1e-11 43
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 1e-11 43
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 3e-11 42
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 7e-11 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SpiGrapes_1642 YP_005062459.1 transposase VFG0792 Protein 1e-14 45
SpiGrapes_1642 YP_005062459.1 transposase VFG1698 Protein 2e-14 45
SpiGrapes_1642 YP_005062459.1 transposase VFG1709 Protein 1e-14 45
SpiGrapes_1642 YP_005062459.1 transposase VFG1052 Protein 3e-14 44
SpiGrapes_1642 YP_005062459.1 transposase VFG1665 Protein 1e-11 42