Gene Information

Name : SpiGrapes_0161 (SpiGrapes_0161)
Accession : YP_005061035.1
Strain : Sphaerochaeta pleomorpha Grapes
Genome accession: NC_016633
Putative virulence/resistance : Resistance
Product : polar amino acid ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 172400 - 173134 bp
Length : 735 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :
ATGAGAATGGAACTGAACAGCATAAGCAAGAGCTTTAATGGGAATCTGGTACTGAAGGATATTTGTTTTTCCCAGGACAT
TAGTTCTGTGGCAATCATCGGTCCTTCAGGGGGTGGTAAGTCAACCCTGCTAAGGATCCTCGGAGGCTTGCTTGCCCCCG
ATTCTGGCACCTTGGGATTTGATGGGAAAACCGTACATTTCAATGAGAAAGATCTTATAGAGTACAGAAAAGATATCAGC
TTTGTTTTCCAGAGCAAGGGGTTGTTTGAACATCTTCCCGCCTTGGAAAACGTTACACTTCCCTTGGTACATACACTTGG
CCTTGAAAAGTCGGAGGCCAAGGCAGCGGCGCAAAAACTCTTTGACAGATTCGGGCTCAGTGATACTGAGAAAAAATACC
CTTCCCAGTTATCTGGGGGCCAGCAACAACGTATAGCCATTGCCCGTTCGTTGGCTATGAAGCCAAAGCTTTTACTCCTT
GACGAACCTACCTCTGCCCTCGACCCTGAATATACCTCAGAGGTCTTGGATATGCTGACGGAACTGCAAGGGGAGGGGTT
GAAAACCATTATTGTAACCCATGAGATGGGATTTGCAAAAAATGCCTGTGAAACAGTTGTTTTTCTCTCTGGCAATAGAA
TTCTGGAACAAGGGAAGAGTTCAGAGATTTTTTCGCACCCCCAGACGAAACAATTGCAATCGTTTTTGGATAAAATCCTT
GAATGGAATGTATAG

Protein sequence :
MRMELNSISKSFNGNLVLKDICFSQDISSVAIIGPSGGGKSTLLRILGGLLAPDSGTLGFDGKTVHFNEKDLIEYRKDIS
FVFQSKGLFEHLPALENVTLPLVHTLGLEKSEAKAAAQKLFDRFGLSDTEKKYPSQLSGGQQQRIAIARSLAMKPKLLLL
DEPTSALDPEYTSEVLDMLTELQGEGLKTIIVTHEMGFAKNACETVVFLSGNRILEQGKSSEIFSHPQTKQLQSFLDKIL
EWNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SpiGrapes_0161 YP_005061035.1 polar amino acid ABC transporter ATPase NC_012469.1.7686878. Protein 1e-25 41