|
Name : SpiGrapes_1319 (SpiGrapes_1319) Accession : YP_005062142.1 Strain : Sphaerochaeta pleomorpha Grapes Genome accession: NC_016633 Putative virulence/resistance : Virulence Product : TRAP transporter subunit DctM Function : - COG functional category : - COG ID : - EC number : - Position : 1427360 - 1428631 bp Length : 1272 bp Strand : - Note : PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit DNA sequence : ATGATTTTATTTTTTGTAGCCTTTGTCGTCATGCTGTTGGTAGGCGTGCCTATCAGCATTTCTATCGGGGCCAGTGCCAT CCTCGGCTGTATCCGCTTGGGGTATCCTTTGATGGTTATCGGACAGAAAATGGTTTCCGGTATCGACTCTTTTCTCCTTA TCGCCATTCCCTTATTCATCCTTGCCGGGAATTTGATGAATGCGGGTAAAATAACAGAAAAAATATTCGATTTTGCCAAA CGGTTGGTCGGATGGATTCCCGGAGGCCTTGGTCATGCCAATGTCGTTGCCAGCTTGATCTTTGCAGGCATGAGCGGCAG TGCCGCAGCCGATGCCGGCGGATTGGGTACCATTGAGATGGAAGCTATGACCACCAACGGCTATGATGAAGATTTTTCTG CTGCCGTTACCGCAGCCTCCTCGGTCATCGGTCCAATCTTTCCTCCCAGTATCCCGCTCATTATTTATGGGTCGGTTGCC AGTGTGAGCGTTTCCGAACTGTTTATCGGTGGAGTTATACCTGGGTTGCTAATGAGTGTGGCCCTGATGGTCATGGTCTT TTTCTTTGCTATCAAGCGAGGGTATCCCAGGTTTCCGTTCAGCCTCAAGGAGCTGGGGAAACAGTTCATTGCATCGATTC TCTCAATCATTACCCCTTTGATTATCCTCAGCGGATTCACCGCTGGCTGGTTTACCCCTACAGAAGCCTCCAGCGTTGCC GTTGCGTACGCCTTGCTGATTGCCATTGCGGTTTACCACACCATGGATTGGAAAACCTTCAAGAAATGCTTGCTGGAGTC TGCACTTACATCGGCTAACACCTTGTTCATCATCGGCACCTCCCTGCTGTTCTCCTATGTAATGGTGAAAGAAGGCATTT CAACAGAAATTGCCAATTTCATCCTGGGGATAAGCGATAACCCGAATCTCATCCTGCTGGTGATCAACATCATCCTGCTG ATCTTGGGAATGTTCATGGAACCGGGTGCAATCCTTACCCTCATGATTCCTGTTTTACTTCCCATCGTACATAGCCTTGG AATTGATCTTGTCCAGTTCGGTGTGGTTATGGTCCTCAACCTGATGATCGGCCAGGTTACCCCTCCGTTTGGGGTCTGTC TCTTTATCATTTCCGATGTTGCCAAAATTGAATTGAACCGTATGTACAAATCCATTCTCCCGTTCATTGGCCCTTTGTTG GTCGTTCTTATGATGTGTACGTTCATCCCATCGCTGGTAACCTGGTTGCCTGGTAAACTGTTGGGTGCTTGA Protein sequence : MILFFVAFVVMLLVGVPISISIGASAILGCIRLGYPLMVIGQKMVSGIDSFLLIAIPLFILAGNLMNAGKITEKIFDFAK RLVGWIPGGLGHANVVASLIFAGMSGSAAADAGGLGTIEMEAMTTNGYDEDFSAAVTAASSVIGPIFPPSIPLIIYGSVA SVSVSELFIGGVIPGLLMSVALMVMVFFFAIKRGYPRFPFSLKELGKQFIASILSIITPLIILSGFTAGWFTPTEASSVA VAYALLIAIAVYHTMDWKTFKKCLLESALTSANTLFIIGTSLLFSYVMVKEGISTEIANFILGISDNPNLILLVINIILL ILGMFMEPGAILTLMIPVLLPIVHSLGIDLVQFGVVMVLNLMIGQVTPPFGVCLFIISDVAKIELNRMYKSILPFIGPLL VVLMMCTFIPSLVTWLPGKLLGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 4e-46 | 46 |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 5e-46 | 46 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 5e-46 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SpiGrapes_1319 | YP_005062142.1 | TRAP transporter subunit DctM | VFG1110 | Protein | 2e-46 | 46 |
