Gene Information

Name : ssb (SCc_710)
Accession : YP_005060831.1
Strain : Serratia symbiotica Cinara cedri
Genome accession: NC_016632
Putative virulence/resistance : Virulence
Product : single-strand DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1607264 - 1607773 bp
Length : 510 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTAGCAGAGGCGTAAATAAAGTAATTCTGGTAGGTAATCTAGGTCAAGATCCAGAAGTTCGTTATATGCCAAATGG
AGGCGCTGTAGCTAATATTACTTTAGCAACCTCTGAAAGTTGGCGTGACAAAATAACAGGCGAACAAAAAGAAAAAACTG
AATGGCACCGTGTAGTATTATTCGGTAAAGTAGCGGAAGTAGCAGGCGAATATTTACGAAAAGGCGCACAAGTATATATC
GAAGGTTCTCTGCAGACACGTAAATGGACTGATCAGTCTGGCACAGAAAAATATACAACTGAAGTGATAGTTAATATTGG
TGGAACCATGCAAATGCTAGGAAATCGACATAGCGTTAGCGCTATGGCAAGCAATAATAATCAAAGTAGTAGTCAATCAC
AATACTCACAGAGTGATAATGCTAAGCGGGAGCGAATAGCACATAACAAATCAGCTGGGGATATTAATAATGAGCCACTA
ACAGACTTTGATGATGAAATACCTTTTTAA

Protein sequence : 
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKITGEQKEKTEWHRVVLFGKVAEVAGEYLRKGAQVYI
EGSLQTRKWTDQSGTEKYTTEVIVNIGGTMQMLGNRHSVSAMASNNNQSSSQSQYSQSDNAKRERIAHNKSAGDINNEPL
TDFDDEIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 2e-44 63
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 2e-44 63
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 1e-44 63
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 1e-32 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssb YP_005060831.1 single-strand DNA-binding protein VFG0576 Protein 3e-43 65