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Name : dnaB (SCc_708) Accession : YP_005060829.1 Strain : Serratia symbiotica Cinara cedri Genome accession: NC_016632 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : - COG ID : - EC number : - Position : 1600756 - 1602180 bp Length : 1425 bp Strand : + Note : - DNA sequence : ATGGCAGGAAAAAAGGCAACCCATAAAACAAACGCGGATGAAGCTCGAAATATTCCACGAGACCGTCAACTAGAAGGACT AAAAATACCGCCGCATTCGCTGGAGGCTGAGCAATCGGTATTGGGTAGTTTAATGCTTGATAACAAACGCTGGGATAATA TATCAGAGCGTGTGGTAGCTAATGATTTCTTTATCCGCCCACACCGCTTAATCTTTACCGAAATGCATCGCCTGCTAGAA ATGAGAAAACCAATCGACTTAATTACTATTTCTGAGTCCTTAGAGCAAAGAGGAGAGCTGGATTTAGTGGGCGGTTTTGC CTACTTAGCTGAATTATCAAAAAACACTCCAAGCGCTGCTAACATTAATGCCTATGCCGATATCGTACGCGCACGTGCAG TAGTACGCGAAATGATCTCAGCAGCCAATGAAATAGCTGAGGCTGGCTATGACCCGCAGGGACGTAGTAGCGAAGATTTA CTTGATCTCGCAGAATCACGTGTGTTTCAGATTGCCGAAACTCGTGCAAATAAGAATGATGGCCCAAAGAATATTAGCCG TGTCCTAGAGGACACAGTATCACGTATTGAGCAACTCTACCAACAACCACACGACGGTATTACCGGTGTAGACACTGGTT ATCAAGATCTAAATAAAAAAACTGCTGGTTTGCAGAAATCTGACCTAATTATTATTGCAGCCCGTCCATCAATGGGAAAA ACTACCTTTGCAATGAACCTATGTGAACACGCCGCAATGACCCAAGAAAAACCAGTGCTCATCTTCAGTCTTGAAATGCC TAGCAACCAAATAATGATGCGTATGTTGGCATCACTATCCCGCGTAGATCAAGCACGTATTCGTACGGGCAGACTCAATG ATGAAGACTGGGCGCGCATTTCTAGCACTATAGGTATCTTACTAGAGAAGCATAATATGTACATCGACGACTCTTCTGGC TTGACGCCAACTGAAGTACGCTCACGGGCGCGACGTATTTTCCGCGAACACGATGGACTTAGCCTAATTATGATTGACTA TCTGCAACTTATGCGTGTGCCTGCTTTATCTGATAACCGTACGCTAGAGATCGCTGAAATTTCCCGCTCACTTAAAGCAT TAGCTAAAGAGCTTCAAGTTCCGGTGGTAGCGTTATCACAGCTAAACCGTTGCCTAGAACAACGTGCGGATAAACGTCCA GTAAACTCTGACTTACGTGAATCTGGTTCTATTGAGCAAGATGCTGATCTTATCATGTTCATTTACCGTGATGAAGTGTA TCACGATAATAGTAATTTAAAAGGGATTGCTGAAATCATCCTAGGTAAGCAGCGTAATGGTCCAATTGGTACAGTATTAC TGACCTTTAACGGTCAGTGGTCACGTTTTGATAACTATGCAAGGGCACAGTATGAAGATGAATGA Protein sequence : MAGKKATHKTNADEARNIPRDRQLEGLKIPPHSLEAEQSVLGSLMLDNKRWDNISERVVANDFFIRPHRLIFTEMHRLLE MRKPIDLITISESLEQRGELDLVGGFAYLAELSKNTPSAANINAYADIVRARAVVREMISAANEIAEAGYDPQGRSSEDL LDLAESRVFQIAETRANKNDGPKNISRVLEDTVSRIEQLYQQPHDGITGVDTGYQDLNKKTAGLQKSDLIIIAARPSMGK TTFAMNLCEHAAMTQEKPVLIFSLEMPSNQIMMRMLASLSRVDQARIRTGRLNDEDWARISSTIGILLEKHNMYIDDSSG LTPTEVRSRARRIFREHDGLSLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRCLEQRADKRP VNSDLRESGSIEQDADLIMFIYRDEVYHDNSNLKGIAEIILGKQRNGPIGTVLLTFNGQWSRFDNYARAQYEDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-93 | 52 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-101 | 52 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 3e-102 | 52 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 8e-101 | 52 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-96 | 48 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 3e-86 | 48 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 3e-86 | 48 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 2e-81 | 47 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 4e-78 | 44 |
