Gene Information

Name : hemC (SCc_681)
Accession : YP_005060817.1
Strain : Serratia symbiotica Cinara cedri
Genome accession: NC_016632
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1537917 - 1538867 bp
Length : 951 bp
Strand : -
Note : -

DNA sequence :
ATGGTAACGAGTATGATAGATCACATCATTCGCATTGCCACAAGGCAAAGTCCGCTAGCTCTCTGGCAAGCGCATTATGT
TCAGCAGCGTCTAATTACTAGTCATCCAGGCTTGCAGGTTAAGCTTGTGCCGATTATCACCCGTGGTGATATTATTCTTG
ATACACCTTTGTCTAAGTTAGGTGGTAAGGGATTGTTTGTACAAGAGCTTGAGCTAGCGTTATTAAAAGATCGTGCTGAC
ATTGCCGTGCATTCAATGAAGGATGTGCCAGTTATTTTCCCGCTTGGCCTAGGGTTGACTACTATTTGTGAGCGTGACGA
TCCACGTGATGCATTCGTATCTTATCGTTTTTCTTCTATTGATCAACTACCTCAGGGTGGCATTATTGGTACTTCAAGTT
TACGCCGTCAATGTCAACTACGTGAACGTCGGCCAGATTTAGTGGTGCGTGATCTACGCGGTAATATCGGCACTCGTCTA
GCAAGGTTACATAATAATGATTATGATGCTGTCATTTTAGCTGTAGCTGGATTGAAACGCTTAGGGTTGGCGCAGCGTAT
ATTCTGTCCTTTAAGTACTGAAGAGTGTCTACCTGCGGTTGGTCAGGGCGCAGTAGGTATTGAATGTCGTCTAGATGATG
ATGTTACTCGTGCGCTGCTAGCGCCGTTAAATCATACTGTAACTGAAACTTGCGTGCGCGCCGAACGAGCTATAAATACT
TGTCTAGAAGGCGGTTGCCAGGTGCCAATAGGTAGTTATGCTGAATTAGACGGCGATAGTTTATGGTTACGAGCGCTTGT
TGGTTCTTTAGATGGTAGGCAAATAGTTCGCGGTGAATGTCGTGGTCCGGCTACTAGCGCCGAACAAATTGGTATTGAAT
TGGCAGAGGAGTTACTAGCGCGAGGTGCGCGAAAGATTTTGCGTGATGTTTACCAGAATTTGCTGTCATGA

Protein sequence :
MVTSMIDHIIRIATRQSPLALWQAHYVQQRLITSHPGLQVKLVPIITRGDIILDTPLSKLGGKGLFVQELELALLKDRAD
IAVHSMKDVPVIFPLGLGLTTICERDDPRDAFVSYRFSSIDQLPQGGIIGTSSLRRQCQLRERRPDLVVRDLRGNIGTRL
ARLHNNDYDAVILAVAGLKRLGLAQRIFCPLSTEECLPAVGQGAVGIECRLDDDVTRALLAPLNHTVTETCVRAERAINT
CLEGGCQVPIGSYAELDGDSLWLRALVGSLDGRQIVRGECRGPATSAEQIGIELAEELLARGARKILRDVYQNLLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-80 58
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-80 58