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Name : kdsB (SCc_508) Accession : YP_005060659.1 Strain : Serratia symbiotica Cinara cedri Genome accession: NC_016632 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : - COG ID : - EC number : - Position : 1140724 - 1141470 bp Length : 747 bp Strand : - Note : - DNA sequence : ATGAGCTTTATAGTGATAATTCCTGCTCGTTACGCATCTACTCGCTTACCGGCTAAGCCTTTGATTGATATTAATGGTAT ACCGTTGGTAGTGCGTGTAATGAATCAAGCACATAAATCTGGGGCTAATCGTGTGATTGTGGCTGTTGATCATCCAGAGG TAGCTAAAATTGTTCAAGCAGCTGGTGGCGAAATATGCATGACTCGAATAGATCATCAATCGGGCACTGAACGCCTAGCA GAAGTTATTGAGGTTTATAATTTTCCTGATGATCAGATTATTGTTAATCTTCAGGGAGATGAGCCGCTGATCTCACCACT TATTATCCGTAATATGGTAGAAAATTTAATCACTAGCTCTATTAGTATAGTTACATTAGCAACTCCCATTAATAGCGCAG AAGATGCTTTGAATCCTAATGTAGTTAAGGCAGTAATAGATAATCAAGGATATGCACTCTATTTTTCACGTGCTCCAATT CCCTGGAATTTTAATCGACTTACTTTATCTCAAGATTTCATTTGCGACGCCCTTTTACGCCATATAGGGATTTATGCCTA CCGTGCTGGTTTTATTCGTCGTTATATTAGTTGGCAGCCAAGTCAATTGGAGCAGATTGAGTCTTTGGAGCAATTACGTA TATTGTGGTATGGAGAAAAAATTTCTGTAGCAGTTACTAAGGTAACTGTGGCCGTGGGTATTGATACGCTTGAGGATTTA CAGCGTATACGTGATATTCTATATTAG Protein sequence : MSFIVIIPARYASTRLPAKPLIDINGIPLVVRVMNQAHKSGANRVIVAVDHPEVAKIVQAAGGEICMTRIDHQSGTERLA EVIEVYNFPDDQIIVNLQGDEPLISPLIIRNMVENLITSSISIVTLATPINSAEDALNPNVVKAVIDNQGYALYFSRAPI PWNFNRLTLSQDFICDALLRHIGIYAYRAGFIRRYISWQPSQLEQIESLEQLRILWYGEKISVAVTKVTVAVGIDTLEDL QRIRDILY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 6e-34 | 41 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 4e-34 | 41 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 4e-34 | 41 |
