Gene Information

Name : ribD (SCc_468)
Accession : YP_005060625.1
Strain : Serratia symbiotica Cinara cedri
Genome accession: NC_016632
Putative virulence/resistance : Unknown
Product : diaminohydroxyphosphoribosylaminopyrimidine deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1037982 - 1039091 bp
Length : 1110 bp
Strand : +
Note : -

DNA sequence :
ATGCACAGTGACGAATTTTATATGGCACACGCTTTTAAATTAGCGCGCCTAGGTCGTTTTACTACAGCTCCTAATCCCAA
TGTTGGTTGTGTTATTGTGCGTAATGGGGTAATCGTCGGTGAAGGGTATCATTTACGCGCCGGCGAGCCACACGCAGAAG
TACATGCATTAAATATGGCAAAAGAAAAAGCACAAGGTGCAACTGCATATACCACACTTGAACCATGCAGCCATTACGGA
CGCACACCTCCGTGCACTGATGCATTAGTTGCAGCAGGTATTAGCCGAGTAGTTAGCGCTATACAAGATCCTAATCCGCG
TGTTACAGGACGTGGATTACAACAATTGCGGAAGGCTAAAATAGAAGTACACTATGGATTAATGTCAGCTGAAGCTGAAG
CAATAAATATAGGTTTTCTAAAACGTATGCGTACTGGATTACCTTATGTGCAACTTAAACTTGCTATATCACTAGATGGT
CGAACAGCGATGGCCTCAGGCCAAAGTCAATGGATCAGTTCTTCTCAGGCTCGTCAAGATGTACAGTATTTGCGTGCACA
AAGCGCATCAATACTCAGTACTAGCGCCACCATATTGGCGGATAATCCAGCACTAACAGTACGCTGGAATGAATTAGACA
CTAAAATACAAAATCTATATCCGCAAAAAAATTTGCGCCAACCATGGCGTATTATTCTCGATAGTCAAAATAGAGTAACA
CCCCAGCATCGCGTAGTACAACAACCTGGAACTACTTGGCTAGCACGTCTAAAACCAGATAAGCAGGTTTGGCCAAAGAA
CGTTGAACAATTAATATTTCCAGCATATAATCATGGTATAAATTTAATGACGCTAATGATGCAACTAGCGAAACGCCAAG
TTAACTCAATATGGATTGAAGCAGGACCTAAATTATCTGGGTCACTACTCCAATCTGGCTTAGTAGATGAGCTAATTGTG
TACATCGCACCAAAATTATTAGGTGATCATAGCCGAGGATTATGTCATCTAACAGGTGTCGAGCAACTAGCTGACGCACC
TGAGTTTATTTTTAATAATATAAAACAAGTAGGGCCTGATTTAAGGCTAAAGCTCAGCGCTAAAATATAA

Protein sequence :
MHSDEFYMAHAFKLARLGRFTTAPNPNVGCVIVRNGVIVGEGYHLRAGEPHAEVHALNMAKEKAQGATAYTTLEPCSHYG
RTPPCTDALVAAGISRVVSAIQDPNPRVTGRGLQQLRKAKIEVHYGLMSAEAEAINIGFLKRMRTGLPYVQLKLAISLDG
RTAMASGQSQWISSSQARQDVQYLRAQSASILSTSATILADNPALTVRWNELDTKIQNLYPQKNLRQPWRIILDSQNRVT
PQHRVVQQPGTTWLARLKPDKQVWPKNVEQLIFPAYNHGINLMTLMMQLAKRQVNSIWIEAGPKLSGSLLQSGLVDELIV
YIAPKLLGDHSRGLCHLTGVEQLADAPEFIFNNIKQVGPDLRLKLSAKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-64 46
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-64 46