Gene Information

Name : lolD (SCc_411)
Accession : YP_005060573.1
Strain : Serratia symbiotica Cinara cedri
Genome accession: NC_016632
Putative virulence/resistance : Resistance
Product : Lipoprotein releasing system ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 893930 - 894634 bp
Length : 705 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTGACCATTATTTATTGGAGTGTCATAACCTATGCAAGAGTTATCAGGAAGGTACGCATAATACTCATGTACTACG
TAATGTTAACCTTGTTATGCGGACGAGTGAGATGATAGCTATTGTTGGTAGTTCTGGCTCAGGTAAAAGTACCTTACTGC
ATCTATTAGGTGGATTGGATTTACCGACTTCTGGTGAAGTAATATTCAAAGGCCTATTGTTAAATAGTATTTCTGCGGCG
AGTAAAGCAAAACTGCGTAACCACCAAATCGGTTTTATTTATCAGTTTCATCATTTATTACCAGACTTTACTGCATTAGA
GAATATAGCCATGCCATTATTGATTGGCGGTGTTCACACAGCTCTAGCGCAGAAAAAAGCAACAGAAATGCTTGTCGCAG
TAGGTTTAGAGAAGCGTAGCAAGCATCGTCCTTCTGAACTATCAGGCGGTGAACGACAACGAGTGGCAATCGCTCGTGCA
CTAGTTAATAACCCGGCGCTAGTGTTAGCAGATGAACCTACTGGTAACCTGGATCAGTATACCGCGAATAGTATTTTTAA
ATTATTAGATGAGCTAAATGTACGTCAGGGTACAGCCTTTTTAGTCGTAACCCATGATTTACATTTAGCCAAGCAACTCA
GTAGCCAATTAGAAATGGTTGATGGCTGTCTTCAGACGCCATTAACTTTATTTGGTGTTGAGTAA

Protein sequence : 
MSDHYLLECHNLCKSYQEGTHNTHVLRNVNLVMRTSEMIAIVGSSGSGKSTLLHLLGGLDLPTSGEVIFKGLLLNSISAA
SKAKLRNHQIGFIYQFHHLLPDFTALENIAMPLLIGGVHTALAQKKATEMLVAVGLEKRSKHRPSELSGGERQRVAIARA
LVNNPALVLADEPTGNLDQYTANSIFKLLDELNVRQGTAFLVVTHDLHLAKQLSSQLEMVDGCLQTPLTLFGVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-19 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-18 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-18 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_005060573.1 Lipoprotein releasing system ATP-binding protein NC_012469.1.7686878. Protein 2e-29 47
lolD YP_005060573.1 Lipoprotein releasing system ATP-binding protein NC_008702.1.4606598. Protein 3e-30 47