Gene Information

Name : smpB (SCc_239)
Accession : YP_005060421.1
Strain : Serratia symbiotica Cinara cedri
Genome accession: NC_016632
Putative virulence/resistance : Unknown
Product : tmRNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 476623 - 477105 bp
Length : 483 bp
Strand : +
Note : -

DNA sequence :
ATGATAAATAAAAAAACACATAAATATAATTTTGTCACTATTGCACAAAACAAGCGCGCGCGTTTTGAATATTTCATCGA
AGAGGAAATAGAAGCTGGTATATCATTAGAGGGTTGGGAAGTCAAATCGCTACGAGCAGGTAAAGCTAATCTTAGCGATA
GTTATGTGACATTTTATAATCATGAAGCTCATCTTTTTGGTGTCACTATCATTCCGCTTAGTGATGCTTCATCGCATGTA
TTATGTGATCCAATACGTACTAGAAAACTGCTACTGAATAAGAGTGAGTTAGAGTTTCTCAGTGGTCGTGTAAATTATAA
GGGGTATACGGCTATAGCGCTTTCTATATATTGGAAAAAAGTTTGGTGTAAAGTTAATATCGGCATCGCAAGAGGTAAGA
AGGAACACGATAAGCGTGCTTGCATCAAAAATCGTGAATGGCAAAAGATAAGATCTTATATCATAAAAAACACTAATCAT
TAA

Protein sequence :
MINKKTHKYNFVTIAQNKRARFEYFIEEEIEAGISLEGWEVKSLRAGKANLSDSYVTFYNHEAHLFGVTIIPLSDASSHV
LCDPIRTRKLLLNKSELEFLSGRVNYKGYTAIALSIYWKKVWCKVNIGIARGKKEHDKRACIKNREWQKIRSYIIKNTNH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 4e-37 55
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 3e-21 45