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Name : lysS (SCc_192) Accession : YP_005060377.1 Strain : Serratia symbiotica Cinara cedri Genome accession: NC_016632 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 370535 - 372052 bp Length : 1518 bp Strand : + Note : - DNA sequence : ATGTTTAAGCAACAATCACAGGGTTTAGATGATTTACCAGCTCTCGATAACGAGATGCAGTCTCGTTATAAGAAACTAAC TGCTTTGCGTGAAAAAGGCATAGCATTTCCGAATAATTTTCGCAGAAATACTATTTCTGATAAGCTACATGCCGCTTATG ATAATAAGAAAAAGCAGGAGTTAGAGGTTCTCTCTATAGAAGTTACTGTTGCTGGTCGCATGATGACTCGCCGTATTATG GGTAAATCATCATTTGTTACTTTACAGGACGCAGGTGGTTGTATTCAGTTATATGTAGCGTGCGATGTACTCACTATAGA TCTTTATAATGATCATTTTAAGAAATGGGATCTAGGTGATATTATAGGCGCACGCGGCACATTATTCAAAACTAAGACCG GAGAATTGTCAATAAATTGTATTGAATTACATTTATTAACTAAATCTTTGCGTCCGTTGCCGGATAAATTTCATGGTCTT ACTGATAAGGAAACTTGTTATCGTCAGCGTTATTTAGACTTAATTGTTAATGAAAGATCTCGTGACACTTTTAAGCTTCG TTCTCAATTAATAATTTCTATACGTAACTTTATGATAGAACATGGTTTCTTAGAAGTTGAAACTCCAATGATGCAAGTGA TTCCGGGTGGCGCATCAGCACGCCCCTTTATTACTCATCATAATGCATTAGATATAGATATGTATCTACGTATTGCTCCA GAACTATATCTAAAACGTCTGGTAGTTGGTGGATTTGAGCGAGTTTTTGAAATTAATCGTAATTTCCGTAATGAGGGTAT ATCGTCACGTCATAATCCAGAGTTTACTATGATGGAACTCTATATGGCTTACGCTGATTACAATGATTTGATTGAATTTA TTGAATTATTATTTTGTACTTTGGCGGAGAAAGTTAAAGGTACTAGCTTAGTACATTATGGTGATGTAGTATTTGATTTT AGTAAACCATTTGAAAAACTAGCAATAACAGAGGCGATCAAGAAATATCGTCCAGAAATTGATTTAGCTGATCTATCTGA TATAGTGAAAGCTATAGCTGTTGCTAAATCTATTGGTATCGAGGTTGAAAAAAACTGGGGCTTGGGTCGTATTGTAACTG AAATTTTTGAAGCAGTCGTGGAAGGTCAATTAATTCAACCGACCTTTATTACCGGGTATCCAGCTGAAGTATCTCCTCTA GCACGTCGCAATGATCAGAACTCAGAGATCACTGATCGTTTTGAGTTATTTATCGGTGGTTATGAAATTGGCAATGGTTT TTCTGAACTTAATGATTCAGAGGATCAGGCGCGACGTTTTGCTACACAGGCAAGTATTAAAGGTGTCTCTGATAGAGATG ATGCATTCTATGATGCCGACTATATAATTGCACTAGAGCATGGCTTACCACCAACTGCAGGTTTAGGACTAGGTATTGAT CGTATGGTTATGCTATTCACCAATAACCATACTATACGTGATGTAATTTTATTTCCAGCAATGCGTTTACAGAAATAA Protein sequence : MFKQQSQGLDDLPALDNEMQSRYKKLTALREKGIAFPNNFRRNTISDKLHAAYDNKKKQELEVLSIEVTVAGRMMTRRIM GKSSFVTLQDAGGCIQLYVACDVLTIDLYNDHFKKWDLGDIIGARGTLFKTKTGELSINCIELHLLTKSLRPLPDKFHGL TDKETCYRQRYLDLIVNERSRDTFKLRSQLIISIRNFMIEHGFLEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGISSRHNPEFTMMELYMAYADYNDLIEFIELLFCTLAEKVKGTSLVHYGDVVFDF SKPFEKLAITEAIKKYRPEIDLADLSDIVKAIAVAKSIGIEVEKNWGLGRIVTEIFEAVVEGQLIQPTFITGYPAEVSPL ARRNDQNSEITDRFELFIGGYEIGNGFSELNDSEDQARRFATQASIKGVSDRDDAFYDADYIIALEHGLPPTAGLGLGID RMVMLFTNNHTIRDVILFPAMRLQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 8e-145 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005060377.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 4e-145 | 64 |
