Gene Information

Name : AciX8_4729 (AciX8_4729)
Accession : YP_005060028.1
Strain : Granulicella mallensis MP5ACTX8
Genome accession: NC_016631
Putative virulence/resistance : Virulence
Product : UDP-glucose 4-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5997173 - 5998168 bp
Length : 996 bp
Strand : +
Note : KEGG: aca:ACP_1490 exopolysaccharide biosynthesis protein; PFAM: NAD-dependent epimerase/dehydratase

DNA sequence :
TTGGCTACTTATCTCATTACCGGTATCGCGGGCTTCATCGGCTCGCACCTCGCACAGGCGCTCGTCGAACGGGGGCACCA
TGTTCGCGGCATCGATAATTTCTCGACAGGGCGGCGTGAGAACCTCGCGCACATCGCCGAAAAGGTCGATCTGCTCACCG
TCGATCTGGTGAACGCCGACGCTGTGGCCCGCGCCTGCGTGGGGGTGGACGCCATTCTGCACCAGGGAGCGCTGCCCAGC
GTGCCGCGTAGCGTGAAGGACCCTCGGCCGAGCCATAACTCCAATCTCGACGGCACGTTCAACCTGCTCGAAGGCGCGCG
CGCGGCGGGCATCCAGCGGGTCGTCTATGCAGCGTCGAGCTCGGCCTACGGCAACCAACCGGGGTTTCCGCGCGTGGAGA
CGATGGCCCCGCAGCCCATCGCACCCTATCCCGTGCAGAAGCTCGCCGGCGAGCTCTACATGCAGAGCTACGCGCGCGTC
TATGGCATGGAGACGGTATGCCTGCGCTACTTCAACATCTTCGGCCCGCGCCAGACACCCGATTCGCCCTACTCCGGCGT
GATCGCGAAGTTCTGCCTGCAGATGCTGAAAACAGGTAAAACCAAGGACGAGCAACCGACCATCCAGGGCGACGGCGAAC
AGGGCCGCGACTTTACCTACATCGCCAACGCGGTAAGCGCGAATCTGCTGGCGCTGGAAGCACCGGCCGAGAAGATTGCG
GGCCGTGTCTTCAACGTCGCCTGCGGCGAGCGCCATAGCCTGAACGAGACCTATCAGATCCTCGCCAGGCTCACCGGTTA
TAAGAAACCGGCGGTTTATACCGAAGCTCGCGCGGGCGATATTCGTGACTCCCTGGCCGACATCTCGGCGGCGCGGGAGG
CCTTTGGCTATGAGCCGATTGTCAGCTTTGAGGAAGGTCTTGCACAGACCGTGGCCTGGTATCGCGAACAACTAGCATCC
AGACATGGGGCACGAGCGTCAAAAGCAACAACATGA

Protein sequence :
MATYLITGIAGFIGSHLAQALVERGHHVRGIDNFSTGRRENLAHIAEKVDLLTVDLVNADAVARACVGVDAILHQGALPS
VPRSVKDPRPSHNSNLDGTFNLLEGARAAGIQRVVYAASSSAYGNQPGFPRVETMAPQPIAPYPVQKLAGELYMQSYARV
YGMETVCLRYFNIFGPRQTPDSPYSGVIAKFCLQMLKTGKTKDEQPTIQGDGEQGRDFTYIANAVSANLLALEAPAEKIA
GRVFNVACGERHSLNETYQILARLTGYKKPAVYTEARAGDIRDSLADISAAREAFGYEPIVSFEEGLAQTVAWYREQLAS
RHGARASKATT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 3e-56 42
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 3e-56 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciX8_4729 YP_005060028.1 UDP-glucose 4-epimerase VFG0430 Protein 1e-56 42