Gene Information

Name : AciX8_3939 (AciX8_3939)
Accession : YP_005059252.1
Strain : Granulicella mallensis MP5ACTX8
Genome accession: NC_016631
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4979414 - 4980091 bp
Length : 678 bp
Strand : -
Note : KEGG: aba:Acid345_3099 two component transcriptional regulator; PFAM: Signal transduction response regulator, C-terminal; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; Signal trans

DNA sequence : 
ATGCGACTTCTGCTGGTCGAGGATGAACCCGAGATTCAGAGCTTCGTTAAGCAGTCCTTGATGGAGGCGGGATACGAAGT
GCATACGGCGGAAGACGGAAGCGCCGCAACCGAGTTAGCGTCCAAACACGTCTACCACGGTCTTATTGTCGACTTAGGAC
TTCCGGATCAGGATGGTATCGACCTCATCCTGCAATTACGCAGATCCGGAGTAACGAGTCCCGTACTGATTCTTTCCGCG
CGGCGGTCGGTAGACGACCGGGTGAAGGGCCTGGAACTCGGTGGCGATGATTACCTTACGAAACCGTTCGCCATCGCAGA
ATTGCTCGCGCGGATGCGGAACCTTCTGCGGCGCAACTCCTCACAGGCTGAAGATGCGATGCGTCTCCGGGTCTGTGACC
TGGAGTTGGACATGCTTAAACGCAGAGCCACTCGAGGCGATGAAGTTCTAAACCTGAGTCCGCAGGAGTTCGTGCTTCTT
GAGTACCTCTGTCGACACGCCGGCCGAGTTGTAACTCGTTCCATGCTTTTGAAGGAGGTCTGGGGCATGCGGATTCAACC
AGACACGAACGTGGTCGATGTTCACATTTACAGGCTGCGAGGCAAGATCGATACTGCCGGCCGTGAGCCGTTGATCAAGA
CACTGCGAGGTATCGGCTATGTCCTCAAAGGCGCCTAA

Protein sequence : 
MRLLLVEDEPEIQSFVKQSLMEAGYEVHTAEDGSAATELASKHVYHGLIVDLGLPDQDGIDLILQLRRSGVTSPVLILSA
RRSVDDRVKGLELGGDDYLTKPFAIAELLARMRNLLRRNSSQAEDAMRLRVCDLELDMLKRRATRGDEVLNLSPQEFVLL
EYLCRHAGRVVTRSMLLKEVWGMRIQPDTNVVDVHIYRLRGKIDTAGREPLIKTLRGIGYVLKGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-32 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciX8_3939 YP_005059252.1 two component transcriptional regulator, winged helix family BAC0083 Protein 1e-40 49
AciX8_3939 YP_005059252.1 two component transcriptional regulator, winged helix family BAC0197 Protein 5e-39 47
AciX8_3939 YP_005059252.1 two component transcriptional regulator, winged helix family BAC0308 Protein 9e-35 46
AciX8_3939 YP_005059252.1 two component transcriptional regulator, winged helix family BAC0125 Protein 3e-38 46
AciX8_3939 YP_005059252.1 two component transcriptional regulator, winged helix family BAC0638 Protein 2e-34 46
AciX8_3939 YP_005059252.1 two component transcriptional regulator, winged helix family BAC0111 Protein 3e-38 45
AciX8_3939 YP_005059252.1 two component transcriptional regulator, winged helix family BAC0347 Protein 4e-34 44
AciX8_3939 YP_005059252.1 two component transcriptional regulator, winged helix family CP001918.1.gene5135. Protein 2e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciX8_3939 YP_005059252.1 two component transcriptional regulator, winged helix family VFG0596 Protein 5e-33 43
AciX8_3939 YP_005059252.1 two component transcriptional regulator, winged helix family VFG1389 Protein 5e-26 42