Gene Information

Name : AciX8_3596 (AciX8_3596)
Accession : YP_005058918.1
Strain : Granulicella mallensis MP5ACTX8
Genome accession: NC_016631
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4553093 - 4553773 bp
Length : 681 bp
Strand : -
Note : KEGG: aba:Acid345_0311 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal trans

DNA sequence : 
ATGCGAATCCTGGTCGTCGAAGATGATCGTAAGATGGCGTTGGTTCTCCGGGATGCACTCGAGAAGCAATCGCACCGTAT
CGTGTTGGCGAACACGGGGTTAGAGGGACTGGATATTGCGTCCAGCCATGAGTTCGAGTCGATCATCCTGGATGCGATGC
TTCCCGGTATGGACGGCTTCACCGTGGCCAGATCCCTTCGTGACGCAAAGGTGTCGACTCCGATTCTGATGCTTACCGCG
CGAGATGCAACGAGCGACGTGGTTCGCGGGCTGGATAGCGGTGTCGACGACTACCTGACCAAACCCTTTGCCTTTGCAGA
GCTGTTTGCCCGGCTGCGGGCACTGGGGCGGCGCACCCTGGCAACAGCTTCGCTGTCGTATCAGCTTGAGGATCTCTGCC
TTGATCCGCACACTCATATAGCGTCACGTTCCGGACGCGCGATTATGCTGACCCGGACAGAATTTCTTCTGCTTGAGTTC
ATGATGCGGAATCCTCATACCGTACTCCGGCGCGAGGCGATCATCAATGCTGTCTGGGGATACGAGCATACCGTCGAGAA
CAATACCTTGGATGCCTTTATGAAGCAGCTTCGCTCGAAGGTAGACGAAGGGCACGGCAACAAGCTTATTCATACGGTCC
GGGGATTTGGTTACAAGCTCACGTCGAGTAAACCTGTATGA

Protein sequence : 
MRILVVEDDRKMALVLRDALEKQSHRIVLANTGLEGLDIASSHEFESIILDAMLPGMDGFTVARSLRDAKVSTPILMLTA
RDATSDVVRGLDSGVDDYLTKPFAFAELFARLRALGRRTLATASLSYQLEDLCLDPHTHIASRSGRAIMLTRTEFLLLEF
MMRNPHTVLRREAIINAVWGYEHTVENNTLDAFMKQLRSKVDEGHGNKLIHTVRGFGYKLTSSKPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-30 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciX8_3596 YP_005058918.1 two component transcriptional regulator, winged helix family BAC0197 Protein 1e-32 46
AciX8_3596 YP_005058918.1 two component transcriptional regulator, winged helix family BAC0125 Protein 2e-32 45
AciX8_3596 YP_005058918.1 two component transcriptional regulator, winged helix family BAC0347 Protein 8e-28 43
AciX8_3596 YP_005058918.1 two component transcriptional regulator, winged helix family BAC0308 Protein 4e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciX8_3596 YP_005058918.1 two component transcriptional regulator, winged helix family VFG1390 Protein 7e-37 42
AciX8_3596 YP_005058918.1 two component transcriptional regulator, winged helix family VFG0596 Protein 1e-30 42