Gene Information

Name : AciX8_3200 (AciX8_3200)
Accession : YP_005058531.1
Strain : Granulicella mallensis MP5ACTX8
Genome accession: NC_016631
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3988911 - 3991388 bp
Length : 2478 bp
Strand : +
Note : KEGG: aca:ACP_2765 ATP-dependent Clp protease, ATP-binding subunit ClpC; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGTTCGAACGCTACACAGAAAAGGCGCGGCGCGTTATCTTCTTCGCGCGCTACGAAGCGAGCCAGTTCGGCTCGCCCTA
CATTGAAACCGAACATCTCTTGCTGGGTTTGCTGCGCGAAGACAAGGCGCTCACCAATCGCTTTCTGCGCTCGCACGCCT
CAGTAGAATCCATTCGCAAACAGATTGAGCAGCACACCACCGTACGCGAGAAGGTCAGCACGTCCGTCGACCTGCCTCTC
TCCAACGAGTGCAAGCGCGTGCTTGCCTACGCGGCCGAGGAGGCCGAGCGTCTTTCGCACAAGCACATCGGCACAGAGCA
TCTTCTGCTGGGCTTGCTGCGTGAAGAAAAGTGCTTTGCAGCAGAGATCCTCACCGAGCGCGGCCTGCGCCTCCCCACCA
TTCGCGAGGAGTTGCAGCGCACCACGCAGGAGAAGCCCGCGCAGCAAAGCGGCGGCTCCAAGCAGCGCGGCGGTCAACAG
GAGCAGTCTCTGCTCGCCGAATTCTCACGCGACCTGACCCAGGCCGCAGCCGATCAGCAGCTCGATCCGCTGGTGGGCCG
CGACTTTGAAGTCGAGCGCGTGATCCAGATCCTCTGCCGCCGCACGAAAAACAACCCCGTGCTCATCGGCGAGCCTGGTG
TCGGCAAGACCGCCATCGTCGAGGGCCTCGCGCAGAAGATCGCCGACGGCGAAGTTCCGAGCTTCCTCGCCGACAAGCGC
GTCCTCTCGCTCGATCTATCGTTGATCGTCGCGGGCACCAAGTACCGCGGCCAGTTCGAAGAGCGCCTGAAGACCATCAT
GAAAGAGCTGATGGAGAATCAAAACTCCATCGTCTTCATCGATGAGTTGCACACGCTCGTCGGCGCTGGCTCGGCCGAGG
GTTCGCTCGACGCCGCAAACATCCTCAAGCCCGCGCTCAGCCGTGGCGAGATCCAGTGCATCGGAGCCACCACCCCGGCG
GAGTATCGCAAGTCCATCGAGAAAGATCGCTCGCTCGAACGCCGGTTCCAGGCCGTCAAGGTCCCGCCGCCGAACGAAGA
AGATGCGATCAAGATCATCATGGGCATCCGTGAGAAGTACGAGAAGTTCCACGCCGTCAGCTACACCGACGACGCGATCA
CCTTCTCCGTCTCGCACTCCAACCGCTACATCCCCGACCGGTTCCTGCCGGACAAGGCGATCGATCTCATCGACGAAGCC
GGTGCCCGCGTGAAGCTGCGCCAGACCACGCTTCCCGAAGAGCTCACCGAGGTCCAGAAGCGCATCAAGTTCATCGTGCA
CCGCATGGAGAACGCCATCGCGAACCACGAGTTCGAGAAGGCACGCTTCTACTCCGACGAGGAGCGCAAGGAGCGCGAGA
ACCTTCGCGTGCTGCGCGACAAGTATCACCTCGACGAGAACTCCGCCGGCATAGTCACACGTGAGGACATCGAAGACGTT
GTCTCGCGCTGGACGGGCGTTCCGATCACCTCGATCAAGGAAGAAGAGACCCAGAAGCTGCTCCGCGTGGAAGAAGAGCT
GCACAAGCGCGTCATCGCCCAGGACAAGGCCATCAGCGCCCTGGCCCGTGCGATCCGCCGCTCCCGTGCCGGTCTCAAAA
ATCCCGCTCGCCCCATCGGCTCGTTCCTGTTCCTCGGACCGACCGGCGTCGGCAAGACCGAAGTCGCGCGCACCCTGGCG
CAGTTCCTCTTCGGTTCGGAGAAGTCGCTGATCCGCTTCGATATGTCGGAGTTCATGGAGAAGCACTCGGTCTCCAAGCT
CATCGGCTCGCCTCCGGGCTACGTCGGATACGAGGAGGGCGGCCAGCTCACCGAGCGGGTCAAGCGCTCCCCCTACTCCG
TCGTGCTGCTCGACGAGGTCGAAAAGGCTCATCCGGACGTCTTCAACCTGCTCCTGCAGGTCTTTGAAGACGGCCAGTTG
ACCGATGGCCTGGGCAACACCGTCGACTTCAAGAACACGATTATCGTCATGACCTCGAACATCGGAGCCAAGCACCTCAT
GAAGCGCGAGGGCCTGGGCTTCCAGTCGAGCAAGGACGAGATTGTGCTCGAGAAGATGCAGGAGATGGTGATGAGCGAGG
TGAAGAGAACCTTCAACCCCGAGTTCCTGAACCGTCTCGATGAGGTCATCGTCTTTACGTCGCTGTCCGACTCCGACCTC
ATGCAGATCCTGGAGCTGCTGGTGCAGAGCCTCAACAGCAACCTGGTGCACAAGGCCATCACCATCTCGGTACAGGACGA
CGCCAAGCGCTGGATCCTGGACAAGACGCTGGTCGACCGCAGCTACGGTGCACGTCCGCTGCGCCGGGCGCTGCAACGTT
ACATCGAAGATCCTCTCTCCGAGGCGCTGATCGCCGGCCTGATCGCCGAACGGCCAGCCTTCCTGGAGGTCTACCTCGAG
AACAACCAGCTTCACTATCGTCCGGTCGCCGCCGACGGCGAAGAGAAGGCAGCCGGCATGGCTCTCACGACCGTCTAA

Protein sequence :
MFERYTEKARRVIFFARYEASQFGSPYIETEHLLLGLLREDKALTNRFLRSHASVESIRKQIEQHTTVREKVSTSVDLPL
SNECKRVLAYAAEEAERLSHKHIGTEHLLLGLLREEKCFAAEILTERGLRLPTIREELQRTTQEKPAQQSGGSKQRGGQQ
EQSLLAEFSRDLTQAAADQQLDPLVGRDFEVERVIQILCRRTKNNPVLIGEPGVGKTAIVEGLAQKIADGEVPSFLADKR
VLSLDLSLIVAGTKYRGQFEERLKTIMKELMENQNSIVFIDELHTLVGAGSAEGSLDAANILKPALSRGEIQCIGATTPA
EYRKSIEKDRSLERRFQAVKVPPPNEEDAIKIIMGIREKYEKFHAVSYTDDAITFSVSHSNRYIPDRFLPDKAIDLIDEA
GARVKLRQTTLPEELTEVQKRIKFIVHRMENAIANHEFEKARFYSDEERKERENLRVLRDKYHLDENSAGIVTREDIEDV
VSRWTGVPITSIKEEETQKLLRVEEELHKRVIAQDKAISALARAIRRSRAGLKNPARPIGSFLFLGPTGVGKTEVARTLA
QFLFGSEKSLIRFDMSEFMEKHSVSKLIGSPPGYVGYEEGGQLTERVKRSPYSVVLLDEVEKAHPDVFNLLLQVFEDGQL
TDGLGNTVDFKNTIIVMTSNIGAKHLMKREGLGFQSSKDEIVLEKMQEMVMSEVKRTFNPEFLNRLDEVIVFTSLSDSDL
MQILELLVQSLNSNLVHKAITISVQDDAKRWILDKTLVDRSYGARPLRRALQRYIEDPLSEALIAGLIAERPAFLEVYLE
NNQLHYRPVAADGEEKAAGMALTTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-179 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciX8_3200 YP_005058531.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 3e-145 52
AciX8_3200 YP_005058531.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 49