Gene Information

Name : AciX8_2876 (AciX8_2876)
Accession : YP_005058209.1
Strain : Granulicella mallensis MP5ACTX8
Genome accession: NC_016631
Putative virulence/resistance : Virulence
Product : type VI secretion protein EvpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3547508 - 3549010 bp
Length : 1503 bp
Strand : -
Note : KEGG: sus:Acid_0232 hypothetical protein; TIGRFAM: Protein of unknown function DUF877; PFAM: Protein of unknown function DUF877

DNA sequence :
TTGAGCACAACCAAGACATCAGTTGCAGCAGCGACCTCTACGGTCGCTGCGAACGGCGAAGCACAGGACGTATCTCTTCT
TGATCAGATTGTTGCCGAAGGACGCTTCAGCAAGGATGCTGCGAGCCAGGAACGTGGCCGCGACATGATCAAGGAATTTG
TGGCCCAGGTACTCGAAGGCCACATGACCGTGAGCCGGGATGCTGAAGCTACTATTCAGACGCGCATTGCGCAGATCGAC
CAGTTGATCTCGCTGCAGTTGAATGAAATTCTTCACCACCCGTCTTTTCAGAAGCTTGAAGGAACGTGGCGCGGGATCCG
GTACCTCATGGACCAGAGCGAAACCAACTCCATGCTGAAGATCAAGGTTCTCAATGTTTCCAAGCGGGAGCTGCTCAAGG
ATCTGCAGAGAGCTTCGGAGTTCGATCAAAGCTCCCTGTTCAAGAAGGTCTATGAAGAAGAGTTCGGAGTCTTCGGTGGT
GCACCTTTTGCTGCACTGATCGGTGACTACGAGTTCGGACGTGGACCCGAAGATATCGAGCTGCTGGAACGAGTGGCGCA
GGTGGCCTCAGCCGCTCATGCTCCGTTCCTTTCTGCTGCCTCGGCTAATCTGCTTAACCTCGAGGACTTTACCCAGCTTG
GAAGCCCGCGCGACATCGGAAAGATCTTCGATACGACCGAGTATGCCAAGTGGAAGAGCTTCCGCCAGTCTGAGGACTCG
CGCTATGTAGGGTTGACGCTGCCTCACGTTCTGATGCGTCTGCCCTATGGAAAAGAGACGAAAGCTGTCGACGACTTCGA
CTACGAAGAAGCAGTCGATGGTACGGATCACTCCAAGTATCTGTGGGGCAATGCAGCCTATGCTTTGGGTGCGCGTCTCA
CAAACGCATTCGCAAGGTATGGCTGGTGCGCTGCGATCCGCGGTGTTGAGGGTGGCGGCCTTGTGGAAGGACTTCCGGCA
CACACCTTCCGTACCGATGAGGGTGATGTCGCACTCAAGTGCCCCACGGAGATTGCGGTTACAGACCGTCGCGAAAAAGA
ACTCGCCGATCAGGGCTTTATCCCGTTGGTGCACTGCAAGGGCACAGACTACGCGGCCTTTTTCAGTGTTCAGTCCGGCA
ACAAGCCGAAGCTCTACGACAAAGATGCGGCGAATGCGAATGCTCGGCTCTCCGCTCAGCTCCCATACATTCTCGCGATG
TCGAGATTTGCGCACTATCTTAAAGCGATTATGCGCGATAAGCTTGGCAGCTTCATGTCGCGTGACGAATGCGAGATATT
CCTGAACCAATGGATTTCGCATTATGTCTTGTCGAACGATGTTGCGACCCACGCTGCCAAAGCGAAGTTGCCACTCCGTG
AAGCTTCGATTCAGGTGTCAGAGGTTCCCGGCAAGCCTGGTGCCTACCGTGCGGTTGCTTTCCTCAAGCCGCACTTCCAG
TTGGATGAACTCACCATCTCCCTCCGCCTTGTTGCGGATCTTCCTGAGTCTGCGCGCAGCTAA

Protein sequence :
MSTTKTSVAAATSTVAANGEAQDVSLLDQIVAEGRFSKDAASQERGRDMIKEFVAQVLEGHMTVSRDAEATIQTRIAQID
QLISLQLNEILHHPSFQKLEGTWRGIRYLMDQSETNSMLKIKVLNVSKRELLKDLQRASEFDQSSLFKKVYEEEFGVFGG
APFAALIGDYEFGRGPEDIELLERVAQVASAAHAPFLSAASANLLNLEDFTQLGSPRDIGKIFDTTEYAKWKSFRQSEDS
RYVGLTLPHVLMRLPYGKETKAVDDFDYEEAVDGTDHSKYLWGNAAYALGARLTNAFARYGWCAAIRGVEGGGLVEGLPA
HTFRTDEGDVALKCPTEIAVTDRREKELADQGFIPLVHCKGTDYAAFFSVQSGNKPKLYDKDAANANARLSAQLPYILAM
SRFAHYLKAIMRDKLGSFMSRDECEIFLNQWISHYVLSNDVATHAAKAKLPLREASIQVSEVPGKPGAYRAVAFLKPHFQ
LDELTISLRLVADLPESARS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 5e-84 41
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 3e-84 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciX8_2876 YP_005058209.1 type VI secretion protein EvpB VFG2070 Protein 4e-109 51
AciX8_2876 YP_005058209.1 type VI secretion protein EvpB VFG2475 Protein 2e-96 43