Gene Information

Name : AciX8_2869 (AciX8_2869)
Accession : YP_005058202.1
Strain : Granulicella mallensis MP5ACTX8
Genome accession: NC_016631
Putative virulence/resistance : Virulence
Product : type VI secretion ATPase, ClpV1 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3538203 - 3540905 bp
Length : 2703 bp
Strand : -
Note : TIGRFAM: ATPase, type VI secretion system, ClpV1; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; Clp ATPase, C-terminal; KEGG: sus:Acid_0239 ATPase; SMART: ATPase, AAA+ type, core

DNA sequence :
GTGAACCTGAAATCCCTGATTGCGAAACTCAACGACACCTGCCGCAGCGCGATGGAAGGCGCCGCAGGTCTGTGTGTCTC
GCGCACGCACTACGACATTGAGATCGAACACTATCTGCTCAAGCTGCTTGATGGGACGGATAGCGATATCGCTCTCATCT
TGAAGCAGTATGGTGTGGACCGGTCACGACTGACCCGCGAACTCGAACGTTCGCTCGACAAGCTGAAGACGGGAAATGCG
CGCTCGCCGGCATTGAGCCCTCAGTTGCTGCACATGTTTACCGAAGCCTGGACGCTGGCTACGCTCGATTACGAGGCAGG
ACAGATTCGCTCGGGATTTACTCTTCTGGCTCTGTTGACGAACAGTGATCTGTCTCGGACCGTTCGCGAGATCAGCTCTG
AATTGCAGTTGATCTCTGTCGAAGCTCTGCGCAAAGACTTCTTCAATATTGTTAGCTCGTCTCGCGAAGAGACTACCGCT
ATCGGTTTTGGGCAGGATGTGTCCGGACCTGCCTCTGGAACGGCTGCGTCCGGTACGCAACGCCGCACGCCTCATCTCGA
CCAGTACACCGTGAACATGACGGCAAACGCCGCAGCGGGAAAGATAGACACCGTACTGGGCCGCGATGTGGAGATTCGCC
AGGTGATCGATATCCTGATGCGTCGCCGCCAGAACAACCCGATTCTGACCGGCGAGGCTGGTGTAGGAAAGACCGCGGTT
GTGGAAGGCTTCTCTTTGCGCATTGCGGCTGGCGATGTGCCGCCGCCGCTGCGCAACGTTCAGCTTCATTCTTTGGACCT
CGCGCTGTTGCAGGCAGGAGCAAGCGTAAAAGGTGAGTTTGAGAACAGGCTCAAGGGCTTGATTGAGGAAGTAAAGTCCT
CACCTCATCCGATCATTCTCTTCATTGATGAAGCGCATACGATGATCGGCGCCGGTGGCCAGGCCGGGCAGAATGATGCT
GCCAATCTGCTGAAGCCTGCTCTGGCACGTGGAGAGCTTCGCACCATCGCTGCAACCACTTGGTCCGAGTATAAGAAGTT
TTTTGAGAAGGATGCAGCGCTGGCGCGACGTTTTCAGGTCGTCAAGGTTGAGGAGCCGATCGAGCCGCAATGCGGGACGA
TGCTGCGTGGCCTGATCCCAGCGCTTGAGAAGCATCATGGGCTGCGCATCCTGGACGAGGCTGTGACCGCCGCGGTGCGT
TTGTCGCATCGGTATATGGTCGGGCGGCAGTTGCCCGATAAGGCCGTGAGTGTGCTCGATACAGCCTGTGCGCGTCTTTC
GCTCAGCCAGAGCACAACCCCTGGCATCATCGAAGATGCGCAGCGCAGGATTGCGGATCTCGAGACACAGACGCGTATGC
TGAGTCGCGAAGAGGCTGTTGGAGCGAACCACGTGGAGCGGCTGCGTGAGATTGCCGATGCGCTTCTTGTCGAGCAGGCG
AAGCTTGTAACCAGCAATACTCAATGGCAGCAAGAGGTTGCTCTGGTTGAAAAGATTCGTGCATTGCGGACGGAGTTGGA
AGACGCTAACGAAGGCGATCATGATAAGAGCACCGCAGCGCCCTCGCGTGTAGCACTTGCAGCGCTCGAGCGTGAGTTGG
CCGAGGTTCAAGGTGAGTCACCTATGATGAGAGTTGCGGTCGATGCGCAGATAGTGGGGGAAGTTATCTCAGCCTGGACC
GGAATTCCACTTGGAAAGATGGTCAAGGATGAACTTGCGACGGTACTGGAACTTTCCTCTCACCTGCGTAATCGCGTGAT
CGGCCAGGACTATGCCATGGACGCGATCGCACAGCGCATACTTACCTCGCGCGCCAGTCTCGACGATCCAGGAAAGCCTG
TCGGCGTGTTCATGCTCGTGGGGCCAAGCGGCGTCGGTAAGACTGAGACTGCGTTGGCGCTCTCTGACCTGTTGTATGGC
GGCGAACGCAACCTCATTACGATCAATATGTCGGAGTTCCAGGAAGCGCATACTGTTTCCGCACTCAAGGGTTCGCCTCC
GGGATATGTGGGGTACGGCGAGGGCGGTGTGTTGACCGAAGCTGTGCGCCGCCGGCCGTACTCTGTCGTCCTGCTCGACG
AGGTAGAGAAGGCGCATCCCGATGTGCTGGAGCTCTTCTTCCAGGTCTTCGACAAGGGAAGCATGGAGGACGGAGAGGGG
CGCGTCATCAACTTCAAGAATACGGTGTTGATTCTCACCAGCAATGCCGCTACCGATACCATGATGAAGCTGACGGCAGA
TCCTGAGACGATGCCTTTCCCAGAGGCGCTGGTGAATGCGATCAAGCCGGAGCTGAACAAGATCTTCAAGCCCGCGTTTC
TCGGACGCATGTTGATCGTTCCCTACCTGCCGGTTCGGGATGAGGCTCTCAAGCAGATCATCCGCCTTAAACTCGGAAAG
ATTGTCCGTCGCCTGCAGGAGAATCACAGGATCGTTTTGCGCTACGATGACGCTTTGCTGAGCGAGATCGCAAGCCGCTG
CACTGAGGTCGAAAGTGGAGCACGCAACGTAGATAACATCCTGTCGAATACCATGCTCCCCGAGATCTCGCGTGAGCTGT
TATTGCGCATGGTGCAGGGAGATGCAGGTACTGCCGTCTCGGTAGGCGTGGGGGAGGCTGGGGCATTCACCTATCAATGG
AGCACGGGGAGCGCTGTTGCCTTAGAGGACAACGCTCCTGAGCTTGCCGCTGCAACTGCTTAG

Protein sequence :
MNLKSLIAKLNDTCRSAMEGAAGLCVSRTHYDIEIEHYLLKLLDGTDSDIALILKQYGVDRSRLTRELERSLDKLKTGNA
RSPALSPQLLHMFTEAWTLATLDYEAGQIRSGFTLLALLTNSDLSRTVREISSELQLISVEALRKDFFNIVSSSREETTA
IGFGQDVSGPASGTAASGTQRRTPHLDQYTVNMTANAAAGKIDTVLGRDVEIRQVIDILMRRRQNNPILTGEAGVGKTAV
VEGFSLRIAAGDVPPPLRNVQLHSLDLALLQAGASVKGEFENRLKGLIEEVKSSPHPIILFIDEAHTMIGAGGQAGQNDA
ANLLKPALARGELRTIAATTWSEYKKFFEKDAALARRFQVVKVEEPIEPQCGTMLRGLIPALEKHHGLRILDEAVTAAVR
LSHRYMVGRQLPDKAVSVLDTACARLSLSQSTTPGIIEDAQRRIADLETQTRMLSREEAVGANHVERLREIADALLVEQA
KLVTSNTQWQQEVALVEKIRALRTELEDANEGDHDKSTAAPSRVALAALERELAEVQGESPMMRVAVDAQIVGEVISAWT
GIPLGKMVKDELATVLELSSHLRNRVIGQDYAMDAIAQRILTSRASLDDPGKPVGVFMLVGPSGVGKTETALALSDLLYG
GERNLITINMSEFQEAHTVSALKGSPPGYVGYGEGGVLTEAVRRRPYSVVLLDEVEKAHPDVLELFFQVFDKGSMEDGEG
RVINFKNTVLILTSNAATDTMMKLTADPETMPFPEALVNAIKPELNKIFKPAFLGRMLIVPYLPVRDEALKQIIRLKLGK
IVRRLQENHRIVLRYDDALLSEIASRCTEVESGARNVDNILSNTMLPEISRELLLRMVQGDAGTAVSVGVGEAGAFTYQW
STGSAVALEDNAPELAAATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-178 48
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 5e-143 44
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 7e-143 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciX8_2869 YP_005058202.1 type VI secretion ATPase, ClpV1 family VFG2076 Protein 0.0 52
AciX8_2869 YP_005058202.1 type VI secretion ATPase, ClpV1 family VFG2084 Protein 8e-161 47