Gene Information

Name : HMPREF0389_00204 (HMPREF0389_00204)
Accession : YP_005054175.1
Strain : Filifactor alocis ATCC 35896
Genome accession: NC_016630
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 486374 - 487060 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAGTATTAAAAACAAAATCACTAAAAAAATATTATAGTCCATCCGAGGTTATCGTAAAGGCTATTGATGGAGTGGA
TATTTCAGTGTCTCATGGAGAATTTGTGGCGATTGTCGGTTCCAGTGGCAGCGGTAAATCTACTTTGCTTAACATGCTTG
GAGGGTTGGACAGACCAACCGATGGATCCGTACTGGTTGATGGAAAGGATATATTTTCATTTAAAGACGAAGAGCTAACT
ATCTTTAGGCGAAGAAAAATAGGATTTGTTTTTCAGGCGTTTAATCTTGTTCCGGTGCTTAATGTTTATGAAAATATTGT
TCTTCCGATAGAACTAGACGGCAATGAGGTAGACGAAGATTATGTAAATGAAATTATTAATGCATTAGGTCTGGGTGAAA
AAGTAAGCAGCATGCCTAATCAGTTATCAGGAGGACAGCAACAAAGAGTAGCGATTGCTAGAGCACTTGCTACGAAACCT
TCTATCGTACTTGCAGACGAACCGACCGGGAATTTAGATTCAAAAACGAGTCAAGATGTCATCGGACTTTTGAAAGTGAC
AAGTAAAAAAATCCATCAGACAGTAGTTATAATCACTCATAATGAGGAGATTGCTCAAACAGCGGATCGCATTATCAGAA
TAGAAGACGGTCGTGTTGTTTCAAAGGGCGGTGGTTTTGATGCGTAA

Protein sequence : 
MEVLKTKSLKKYYSPSEVIVKAIDGVDISVSHGEFVAIVGSSGSGKSTLLNMLGGLDRPTDGSVLVDGKDIFSFKDEELT
IFRRRKIGFVFQAFNLVPVLNVYENIVLPIELDGNEVDEDYVNEIINALGLGEKVSSMPNQLSGGQQQRVAIARALATKP
SIVLADEPTGNLDSKTSQDVIGLLKVTSKKIHQTVVIITHNEEIAQTADRIIRIEDGRVVSKGGGFDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-36 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0389_00204 YP_005054175.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-73 67
HMPREF0389_00204 YP_005054175.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-61 60
HMPREF0389_00204 YP_005054175.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-36 42
HMPREF0389_00204 YP_005054175.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-33 42
HMPREF0389_00204 YP_005054175.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 4e-38 42