Gene Information

Name : HMPREF0389_00387 (HMPREF0389_00387)
Accession : YP_005053993.1
Strain : Filifactor alocis ATCC 35896
Genome accession: NC_016630
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 285391 - 287139 bp
Length : 1749 bp
Strand : -
Note : -

DNA sequence :
ATGAATCCGCTAAAAAAAACAAAAATTGTGTGTACTATAGGGCCGTCAAGTGGAAAAAAAGAAGTTTTAAAATTGCTTGC
AGAAAATGGAATGAATGTATGTAGATTAAATTTTTCTCATGGAAGTCATGAAGAACACCAAAAAAAAATAGACATCATAA
AAGAAGTTAGAGAAGAATTAAATGAACCTATCGCTATTTTGTTAGATACGAAGGGACCTGAGATAAGAACAGGTATTTTT
TGTAAGGAAGAAGTAGAGTTAAGTACAGGACAACTGTTTACCTTATATATGGATGATATCATAGGAGATCATACAAAATG
TTCTGTTTCATACAAGCATCTGGTTCATGATGTCAAAAAAGATGATATCATTTTAATTGATGATGGATTGATTTCTATGT
TGGTAGTGGAAGTATCGAATGAAAAAATCGTATGTGAAGTTCAGAATGCCGGAATTATTAAAAATAATAAGGGGATTAAT
GTTCCGAATGTAAAAATAAATTTACCTGCTATTACTCAAAAAGATAGGGAGGATATTATTTTTGGGATTAAAAATGGGAT
TGATTTTATAGCTGTATCTTTTGTAAGAAAAGCATCGGATGTGCTATCTATTAGAGAAATATTGGAACAAGAAAATGCTG
AATACATTCAAATTATTTCAAAAATCGAAAATCAAGAAGGAATCGATAATATAGATGATATTTTGATGGTTTCTGATGGT
ATAATGCTTGCAAGAGGAGATTTAGGAGTTGAAATCCCAACAGAAGAAATTCCTATTGTTCAAAAAAGAATCATAAAAAA
ATGCAATTTTTTATCAAAACCTGTTATTACAGCTACCCAAATGTTAGATTCTATGATGAGAAATCCCAGACCAACACGTG
CAGAAGTAACAGATGTTGCAAATGCAATTTATGACGGAACAGATGCAATTATGCTTTCAGGAGAGACTGCTTCAGGAAAA
TATCCGATAGAGTCTGTCAAAATGATGTATAATATCGCCATTAAAACAGAAGAAAATTTAGACTATAAAAACATGTTATT
GGAAAAGTCTATGGCAAGAGAAATGAACATTACAAATGCTATCAGCCATGCTACATGTACAACTGCCAATGATATTGGAG
CAAAAGCTATTATTACTGCAACGGAATCCGGATATACTGCAAAAATGGTATCTAGCTACAGACCTAATCAAATGATTATT
GGCATTATGCATTCTCCCGTTGTAGCAAGACAGATGGGAATTGTTTGGGGAATTCTTCCTGTTAATATAGATAAAATTAC
AGTTTCAACCGATGAATTATTTGATTTATCAATTAATGCATCTATTTCTAAAGGGTTAATTTTTCCGGGAGATATTGTTG
TTATTACGGCAGGGGTTCCTACCAGACAAACGGGATCCACCAATTTAATTAAAGTCCATGTTGTAACAGAAATATTATCT
CAGGGAATTGGAATAGGAGATAAGACAATTATCGGAGTTGCTAGAAAAAATTTAAGAGATTTTCAAAAAAATGATATTTT
GATTGCAAAATATACAGAAAAAGAAATGGTTGATTACATGGAAAATGCATCCGCCATTGTTGTAGAAGAATCAGGTTTAA
CTAATCATACTGCAATTGTCGGCTTAAGTTTAGGAAAGACCGTAATTGTAGGTGCAAAAAATATTGTAGCAAAAATCGAA
GATGGACAAATCATTACCATTTCTCCTAAAAAAGGATATGTATATAAAGGAAATGTTACAGGAGTGTAG

Protein sequence :
MNPLKKTKIVCTIGPSSGKKEVLKLLAENGMNVCRLNFSHGSHEEHQKKIDIIKEVREELNEPIAILLDTKGPEIRTGIF
CKEEVELSTGQLFTLYMDDIIGDHTKCSVSYKHLVHDVKKDDIILIDDGLISMLVVEVSNEKIVCEVQNAGIIKNNKGIN
VPNVKINLPAITQKDREDIIFGIKNGIDFIAVSFVRKASDVLSIREILEQENAEYIQIISKIENQEGIDNIDDILMVSDG
IMLARGDLGVEIPTEEIPIVQKRIIKKCNFLSKPVITATQMLDSMMRNPRPTRAEVTDVANAIYDGTDAIMLSGETASGK
YPIESVKMMYNIAIKTEENLDYKNMLLEKSMAREMNITNAISHATCTTANDIGAKAIITATESGYTAKMVSSYRPNQMII
GIMHSPVVARQMGIVWGILPVNIDKITVSTDELFDLSINASISKGLIFPGDIVVITAGVPTRQTGSTNLIKVHVVTEILS
QGIGIGDKTIIGVARKNLRDFQKNDILIAKYTEKEMVDYMENASAIVVEESGLTNHTAIVGLSLGKTVIVGAKNIVAKIE
DGQIITISPKKGYVYKGNVTGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-83 47
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-83 47
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-83 47
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 6e-83 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0389_00387 YP_005053993.1 pyruvate kinase VFG0479 Protein 5e-84 47