Gene Information

Name : HMPREF0389_01237 (HMPREF0389_01237)
Accession : YP_005055351.1
Strain : Filifactor alocis ATCC 35896
Genome accession: NC_016630
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1881598 - 1882107 bp
Length : 510 bp
Strand : +
Note : -

DNA sequence :
ATGAATATTGCAGTACTGATAGGAAGACTTACTAGGGATCCGGAGCTTAGATACATTCCATCTACAGGAAAAGCTGTAGC
AAATTTTGCAATCGCCGTAGACCGACCGTATACTTCAAAATCCGGAGAACGAATGACAGATTTCTTTAATATCGTTGTTT
GGGGAAAACAAGCTGAAAATTGTGCCAATTATCTTGCTAAAGGTAGATTAGTGGGAATCAAAGGTACCATTGAAAACAGA
AGTTATGAGAACCAAAACGGAGAAAAACGATATATTACCGAAATCATTGCTGAAAATGTTCAATTCCTTGAATGGGGAGA
ACGCAATCAAAATAACAGCAGAACAACAGGTGTCCAATCTAATTATCAAGACTATCAGGGAGGAGCTGCTCCGGTGTTTG
AACCATCCGGATATGGCGACACCCCGCAATCCGCTCCGAATTCTTATGAACCGAAAGGATTGGATGCGGAAGGATATCGT
GAGTTAGAGGACGATGACGTACCATTCTAA

Protein sequence :
MNIAVLIGRLTRDPELRYIPSTGKAVANFAIAVDRPYTSKSGERMTDFFNIVVWGKQAENCANYLAKGRLVGIKGTIENR
SYENQNGEKRYITEIIAENVQFLEWGERNQNNSRTTGVQSNYQDYQGGAAPVFEPSGYGDTPQSAPNSYEPKGLDAEGYR
ELEDDDVPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 2e-23 44
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 1e-23 44
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 1e-25 43
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-25 43
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-25 43
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 8e-26 43