Gene Information

Name : HMPREF0389_01078 (HMPREF0389_01078)
Accession : YP_005055209.1
Strain : Filifactor alocis ATCC 35896
Genome accession: NC_016630
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1721194 - 1721664 bp
Length : 471 bp
Strand : -
Note : -

DNA sequence :
ATGTCTCAACAAAATAATGTCAATAACAGTTTAGCACATACCAAATGGAATTGTAAGTACCATGTAGTATTTGCACCAAA
ATATAGAAGAAAAGTCTTTTATGGAGAAAAAAAGGAAGCGATAAGAGATATAATAAGAACATTATGTCAGTGGAAAGGAG
TTGAAATAATAGAAGGAGAAGTTTGTCCCGATCATATACATCTATTACTTAGTATACCACCAAAAATAAGTGTATCGAGT
TTCATGGGATATCTGAAAGGAAAAAGCAGTCTAATGATATTTCAAAAATATGGAAACATGAAGTTTGCATATAGAAACAG
AGAGTTTTGGTGTAAAGGATATTACGTAGATACCGTAGGTAAAAATACAAAAGCAATACAGGAATATATATCAAATCAAT
TGAAAGTAGATAGAGAAAGTGATCAATTAAGTATATTTGATCCGAGAGACCCGTTTACGGGTAGCAAATAA

Protein sequence :
MSQQNNVNNSLAHTKWNCKYHVVFAPKYRRKVFYGEKKEAIRDIIRTLCQWKGVEIIEGEVCPDHIHLLLSIPPKISVSS
FMGYLKGKSSLMIFQKYGNMKFAYRNREFWCKGYYVDTVGKNTKAIQEYISNQLKVDRESDQLSIFDPRDPFTGSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 9e-51 68
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 2e-49 67
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 1e-43 64
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 2e-32 54
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 3e-32 54