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Name : HMPREF0389_01038 (HMPREF0389_01038) Accession : YP_005055168.1 Strain : Filifactor alocis ATCC 35896 Genome accession: NC_016630 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L7/L12 Function : - COG functional category : - COG ID : - EC number : - Position : 1671409 - 1674552 bp Length : 3144 bp Strand : - Note : - DNA sequence : ATGCCAGGATTCATAGAAGCATCTTATGAAAATTCAATAATAGAATTATTCCAAAATAATTTGGGATATGAGTATGTATA TGGTCCTGATATTGAAAGGGATTTTTACAGTCCATTATATGAGGATGTTTTGGTTGATTCTCTGTATCGTTTAAATAGAG GATTGCCCGATAATGCCATTCAGGATGCTTTGTACAAACTTAGAAACTTTGAGAACGGAGAGCTTGTACAGAAAAATGCA ATTTTTATGGACTATCTGCAAAATGGTATTCCTGTAAGATATTTTGTCAGTGGAGAGGAGCGTTCCTCTATCATCTATCT TGTCGATTATAAAAATGTCGAAAACAACTCCTTTATAGTTGCTAATCAATGGACTTTCATTGAAAACAGTAACAAACGTC CCGATGTAATTCTGTTCTTAAATGGTTTGCCGGTTGTATTGGTTGAACTCAAATCTCCTTCCCGTGAAGAAACGGATGCT TCAGAAGCGTATAGACAACTCCGTAACTATATGCATGAAATTCCGTCTATGTTTATATATAACGCTATTTGTGTTATGAG TGACCAGTTGATATCCAAAGCTGGTACAATTACTTCCGGAGAAGATCGCTTTATGGAGTGGAAAACAAAAGATGGGAATT ATGAAAATACACAATATGCACAGTTTGATACTTTCTTTGAGGGAATGTTTCAAAAGGAAAGACTGCTTGATATCATCAAA AACTTTATTTGCTTTTCAAATGAGGGGATTAACACATTTAAAATTCTCGCCGGATACCACCAATATTTTGCGGTAAGAAA AGCGATTGAATCAACAAAACACGCTATCATTACCGATGGTAAAGGAGGTGTATTTTGGCATACACAAGGAAGCGGTAAAT CGCTTTCAATGGTGTTCTATGCTCATTTATTGCAGGAAGCATTGGAGAGCCCTACTATTGTTGTACTTACTGACAGAAAT GACCTTGATGACCAGCTCTATAGTCAGTTTGCAAAGTGTAAGGACTTTTTAAGGCAAGAACCGTTACAAGCAGAAAGCAG AGAAAATCTAAAAACTTTGCTTGCAGGCAGAAAAGCAAACGGCATAATCTTTACTACAATGCAGAAATTCGAGGAGTCTA ACGAGCCTTTATCTGAACGTCGAAATATTATAGTTATGGCTGATGAAGCTCATAGAGGACAATATGGACTTACTGAAAAG ATTAAAATTACAAAAAATGAAGATGGTGATGAAGTAGCAAAGCGTATTATTGGCACAGCAAGAATTATTCGTAATACACT TCCAAATGCTACATATATTGGATTTACCGGCACGCCTATTTCAGCAAAAGATCGTAGCACCCGTGAAGTATTTGGCGATT ATATTGACATATATGATATGACGCAAGCGGTTGAAGATGGAGCAACTCGTCCGGTTTATTATGAAAGTCGTGTCATTAAG TTAAACCTTGATGAAACTACCTTGAAATTAATTGATGCTGAGTATGATTTGATGGCTCTTAATGCAGATGATGAAGTTAT TGAAAAGAGCAAAAGAGAGCTTGGCCAGATGGAAGCAGTGCTTGGAAATGATAACACTATAAATTCCCTTGTTTGCGACA TTATTGACCACTATGAAAATAATAGAGAGAATCTGCTTACCGGTAAGGCGATGATTGTTGCATATTCTCGTCCTATTGCC ATGAAAATTTATAAGAAAATATTGAAACTTCGCCCAGCTTGGACTGAAAAAGTAGAGGTTGTGATGACTTCCGGGAACAA CGATCCGGAAGAATGGCGACAAATTATTGGTAATAAACACCATAAGAATGAGCTTGCCAAGAAATTCAAAGATAACAGCA GTCTGATGAAGATTGCGATTGTTGTAGATATGTGGTTGACAGGATTTGATGTTCCGTCTCTTGCTACTATGTATGTTTAT AAGCCTATGTCCGGACACAATCTTATGCAAGCAATTGCTCGTGTAAACCGTGTATTTCAAGACAAAGAAGGGGGGCTTGT TGTTGACTATGTTGGAATTGCTACCGCTCTAAAGCAAGCAATGAATGACTATACTTTGCGCGATAAAAAGAACTATGGCG ATACAGATGTTGCCAAAGTTGCATATCCGAAGTTCTTGGAGAAATTATCAGTTTGCCGTGATAAGTTCCATGGATATGAT TATACAAAGTTTATTAATGGTACAGATCTCGAAAGAGCGAAGACTATCAGTGGTGCCGTGAATTTTATTATGGATAGAGA AAAAGTCGATGATAAAGACTCATTCGTAAAAGAAGCTCTTATGCTTCATCAGGCGCTGTCCCTTTGTTCATCGTTAGTTG ATAAAGATAGTAGATTTGAGGCAGCATTCTTTGAGGCTGTTCGAGTTCTTGTTCTCAGACTTACCAATACCGGTGTTGAT AAAAAGATTTCCTTGCCGGAAATGAATGCAAGAATAAATGAACTTTTGAAACAGAGTATTAAAAGTGATGGCGTAATTAA CCTTTTCTCAGATATAAAAGAAGAATTTTCTTTGTTTGACCCAAAATTTCTTCAAGAAGTTGCAAATATGAAAGAGAAGA ATCTTGCAGTCGAACTATTAAAAAAATTAATCGCAGAGCAAGTATCTGTCTACCGTAGAACAAATATTGTAAAATCTGAA AAGTTCAGCGAGATTATGCAGCGTTCTCTCAATGCATATCTTAATGGGATGCTTACCAATGAAGAAGTTATAGAAGAGAT GTTAAGGTTGGCAAAACAGATTGCAGCGGCACATCAAGAGGGAGATAAATTAGGACTGACTGCTGATGAACTGGCTTTTT ACGATGCCTTAACAAAACCACAGGCAATCAAGGATTTTTATGAAAACGAAGAGTTGATTGCAATAACAAAAGAGTTAGCA GATACTCTACGTAAGAATAAGACGATTGATTGGCAGAAGCGTGAATCAGCGAGAGCTAAAATGCGTATGCTGATCAAGAA ACTTTTGAAAAAACATAAATATCCGCCTGAAGGAATGGATGATGCAGTTCAAACTGTAATGAAACAGTGTGAACTTTGGA CGGATAATTATAACTTTGAGGAAGATTATAATGTTTATTCCTATATGAATTATACCGATACATCACTGCCTTTAGTAGCA GAAGAGGAAGAGAAATATAATTGA Protein sequence : MPGFIEASYENSIIELFQNNLGYEYVYGPDIERDFYSPLYEDVLVDSLYRLNRGLPDNAIQDALYKLRNFENGELVQKNA IFMDYLQNGIPVRYFVSGEERSSIIYLVDYKNVENNSFIVANQWTFIENSNKRPDVILFLNGLPVVLVELKSPSREETDA SEAYRQLRNYMHEIPSMFIYNAICVMSDQLISKAGTITSGEDRFMEWKTKDGNYENTQYAQFDTFFEGMFQKERLLDIIK NFICFSNEGINTFKILAGYHQYFAVRKAIESTKHAIITDGKGGVFWHTQGSGKSLSMVFYAHLLQEALESPTIVVLTDRN DLDDQLYSQFAKCKDFLRQEPLQAESRENLKTLLAGRKANGIIFTTMQKFEESNEPLSERRNIIVMADEAHRGQYGLTEK IKITKNEDGDEVAKRIIGTARIIRNTLPNATYIGFTGTPISAKDRSTREVFGDYIDIYDMTQAVEDGATRPVYYESRVIK LNLDETTLKLIDAEYDLMALNADDEVIEKSKRELGQMEAVLGNDNTINSLVCDIIDHYENNRENLLTGKAMIVAYSRPIA MKIYKKILKLRPAWTEKVEVVMTSGNNDPEEWRQIIGNKHHKNELAKKFKDNSSLMKIAIVVDMWLTGFDVPSLATMYVY KPMSGHNLMQAIARVNRVFQDKEGGLVVDYVGIATALKQAMNDYTLRDKKNYGDTDVAKVAYPKFLEKLSVCRDKFHGYD YTKFINGTDLERAKTISGAVNFIMDREKVDDKDSFVKEALMLHQALSLCSSLVDKDSRFEAAFFEAVRVLVLRLTNTGVD KKISLPEMNARINELLKQSIKSDGVINLFSDIKEEFSLFDPKFLQEVANMKEKNLAVELLKKLIAEQVSVYRRTNIVKSE KFSEIMQRSLNAYLNGMLTNEEVIEEMLRLAKQIAAAHQEGDKLGLTADELAFYDALTKPQAIKDFYENEELIAITKELA DTLRKNKTIDWQKRESARAKMRMLIKKLLKKHKYPPEGMDDAVQTVMKQCELWTDNYNFEEDYNVYSYMNYTDTSLPLVA EEEEKYN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 42 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 6e-173 | 42 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 42 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 41 |
