Gene Information

Name : HMPREF0389_00878 (HMPREF0389_00878)
Accession : YP_005055014.1
Strain : Filifactor alocis ATCC 35896
Genome accession: NC_016630
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1504138 - 1505226 bp
Length : 1089 bp
Strand : +
Note : -

DNA sequence :
ATGACTATGGAATATAATAATACTACAGCAAATTCAAGAAAAAATAAACATTTAAACGATTTCGAAAGAGGACAAATTCA
ACTTCTGCATAATAAAGGATATTCAGCATACAAAATAGCAAAAGAACTTCGTAGAGCATCCAACACCATAAGAAATGAGT
TAAAAAGAGGTACAGTAACTCAAATAAAAGGAATACATGATGTACAAGTATATTATCCGGATACAGGTAAGTTAGTATAT
GAGAAGAATCGAAAAAATTGCAAAAAGAAATTTAAAGCCTTGAAATGTAGCAAATATTTAGACTTTGTAAAGCAAAAGTT
TAATGAAGAAAAATGGTCGTTAGATGCAATTTGTGGATATGCAAAGTTAAATAAGCTATATGAAGGTCAAAGAGTCTGCA
CCAAGACATTATACAATTATGTAGATATAGGTCTAATAGGAATAAAATCTATTGATTTGCCCTTAAGAGTGAAAAGAAAA
CCGGCTAAAAAACGAGTAAAAGAAAACAAAAGAAAACTTGGAAAAAGTATAGAAGAAAGACCGCAAGAAATAGAAACAAG
AAAAACATTTGGAAATTGGGAAATAGATACAGTAATACCAAAGAAAAACAAAGAAGAAGCATCATTAATAACCATAACAG
AAAGAAAAAGTCGAATGGAACTAATCTTAAAATTAAACAGAAGAAAAGCATCCATAGTAAATGAAACATTAAAGAACACA
TTGAACAGATTGAAGGAACCACAAAAAATATTTAGAAGCATAACAAGTGATAACGGCTTAGAGTTTGCGAAATTATGTGA
ACTTGAAAAAACATATATAGGAAACATCTATTACTGTCATCCCAATAATCCCCAGGAAAGAGGAACAAATGAAAAGCACA
ATAGCCTAATCAGAAGATTTCTACCGAAAGGAAAATCATTAAATGATTATGAAGAAGAACACTATATAAAGATAATGAAT
TGGATGAACAATTTGCCAAGAAAAATCCTAAATTACCGCACTCCTATAGAAGTTTTTATAGAAGAACTAAATAACTTAGG
ACTTTTAGATGATAATGAGGAATTAGTTCAATTTGATATTGCAATTTAA

Protein sequence :
MTMEYNNTTANSRKNKHLNDFERGQIQLLHNKGYSAYKIAKELRRASNTIRNELKRGTVTQIKGIHDVQVYYPDTGKLVY
EKNRKNCKKKFKALKCSKYLDFVKQKFNEEKWSLDAICGYAKLNKLYEGQRVCTKTLYNYVDIGLIGIKSIDLPLRVKRK
PAKKRVKENKRKLGKSIEERPQEIETRKTFGNWEIDTVIPKKNKEEASLITITERKSRMELILKLNRRKASIVNETLKNT
LNRLKEPQKIFRSITSDNGLEFAKLCELEKTYIGNIYYCHPNNPQERGTNEKHNSLIRRFLPKGKSLNDYEEEHYIKIMN
WMNNLPRKILNYRTPIEVFIEELNNLGLLDDNEELVQFDIAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0314 YP_697643.1 IS1470, transposase Not tested Not named Protein 2e-57 48
CPR_0967 YP_698290.1 IS1470, transposase Not tested Not named Protein 2e-57 48
CPR_0321 YP_697650.1 IS1470, transposase Not tested Not named Protein 7e-57 48
CPR_1078 YP_698400.1 IS1470, transposase Not tested Not named Protein 2e-57 48
CPR_0628 YP_697955.1 IS1470, transposase Not tested Not named Protein 2e-57 47
CPR_0383 YP_697712.1 IS1470, transposase Not tested Not named Protein 2e-57 47
CPR_0379 YP_697708.1 IS1470, transposase Not tested Not named Protein 1e-57 47
CPR_0648 YP_697974.1 IS1470, transposase Not tested Not named Protein 9e-58 47
CPR_1088 YP_698410.1 IS1470, transposase Not tested Not named Protein 2e-57 47
CPR_0659 YP_697986.1 IS1470, transposase Not tested Not named Protein 2e-38 46