Gene Information

Name : HMPREF0389_00630 (HMPREF0389_00630)
Accession : YP_005054770.1
Strain : Filifactor alocis ATCC 35896
Genome accession: NC_016630
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1247251 - 1248468 bp
Length : 1218 bp
Strand : -
Note : -

DNA sequence :
ATGTCAGAGAAAAGACGTGACAATAAAGGTCGCATTTTAAAGACTGGGGAGAGCCAACGAAAAGACGGAAGATACTTATA
TAAATATGTAGATTCATTTGGAGAACCGCAATTTATCTACTCATGGAAACTGGTGGCTACAGACAGAGTACCAGCAGGAA
AGCGTGATTGTGTTCCTCTTCGGGAAAAAGTTGCGGAGCTACTGAAAGACATTCATGATGGCATTGATGTTGTAGGAAAG
AAAATGACACTTTGTCAGCTTTACGCAAAGCAGAATGCTCAAAGACCCAATGTGAAGAAAGGCACGCAAACTGGACGGAA
ATATCTGATGGATATTTTGACAAAGGACAAGTTAGGTGCAAGGAGCATAGACAGCATTAAACCGTCTGACGCTAAAGAAT
GGGCGATTAGAATGAGTGAAGATGGATATGCTTATCAAACCATCAATAACTATAAGCGTTCTTTAAGGGCTTCATTCTAT
ATTGCGATTGAAGACGATTGTGTTCGGAAGAATCCCTTTGACTTCCAGCTAAATACCGTCATTGATGATGATACTGTTCC
TAAAGTCGCATTGACAACGGAGCAGGAAGAAAAGCTGTTATCCTTTGCGAAAGCTGATAAGACCTACAGCAAGAATTATG
ATGAAATCCTGATACTCTTAAAAACGGGTCTTCGTATTTCAGAGTTTGGCGGTCTGACACTTCCAGATTTGGATTTTGAA
AATCGTCTTGTCAAGGTAGACCATCAGTTACTACGAGATACTGAAAATGGATACTACATTGAAACTCCCAAGACTAAAAG
TGGCGAACGACAAGTTCCTATGGTTGAAGAAGCCTATCAAGCGTTTCAGCGAGTGCTGGCGAATCGGAAGAACCGTAAAT
GTGTTGTGATTGATGGTTATAGTAATTTCCTTTTTCTCAATGGGAAAGACTATCCTAAAGTGGCAAGTGATTACAATGGT
ATGTTGAAAAACCTTGTCAAGAAATACAATAAATATCATGAGGATAAGCTACCCCATATCACTCCACACATTTTGCGTCA
TACGTTCTGCACTAACTATGCAAATGCAGGAATGAACCCAAAAGCATTGCAGTACATTATGGGGCATGCGAATATAAACA
TGACGCTGAACTATTACGCACATGCTACATTCGATTCTGCTATGGCAGAGATGAACCGCTTGGAAAAAAAGAAACAGCAG
GAACGTCTTGTTGCTTAG

Protein sequence :
MSEKRRDNKGRILKTGESQRKDGRYLYKYVDSFGEPQFIYSWKLVATDRVPAGKRDCVPLREKVAELLKDIHDGIDVVGK
KMTLCQLYAKQNAQRPNVKKGTQTGRKYLMDILTKDKLGARSIDSIKPSDAKEWAIRMSEDGYAYQTINNYKRSLRASFY
IAIEDDCVRKNPFDFQLNTVIDDDTVPKVALTTEQEEKLLSFAKADKTYSKNYDEILILLKTGLRISEFGGLTLPDLDFE
NRLVKVDHQLLRDTENGYYIETPKTKSGERQVPMVEEAYQAFQRVLANRKNRKCVVIDGYSNFLFLNGKDYPKVASDYNG
MLKNLVKKYNKYHEDKLPHITPHILRHTFCTNYANAGMNPKALQYIMGHANINMTLNYYAHATFDSAMAEMNRLEKKKQQ
ERLVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0917 YP_001198283.1 Tn916, transposase Not tested 89K Protein 6e-178 91
SSU98_0923 YP_001200481.1 Tn916, transposase Not tested 89K Protein 6e-178 91
int YP_008394266.1 integrase Not tested Not named Protein 5e-132 68