Gene Information

Name : HMPREF0389_00606 (HMPREF0389_00606)
Accession : YP_005054746.1
Strain : Filifactor alocis ATCC 35896
Genome accession: NC_016630
Putative virulence/resistance : Unknown
Product : DNA polymerase I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1218589 - 1221207 bp
Length : 2619 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAGGTTATTTCTGATTGATGGAAATTCATTGATTAATCGAGCGTATTATGCGTTGCCGCCACTTATGACAAAGGA
TGGGTTGTATACCAATGCCATTTATGGTTTTTTGATGATGTTCTACAAAGCGATGGATGAATATGCTCCGGATTATGTGA
GTGTTGCTTTTGATTTGAAAGGACCTACTTTTCGTCACAAGGAGTACAAAGATTATAAAGGAACAAGGAAAGGGATGCCT
CCTGAACTTGCAATGCAGATTCAACCGTTGAAAGAGTTACTTGATACAATGGGGGTGCATAGGGCGGAAATCGAAGGGTT
TGAAGCAGATGATATCATTGGAACTCTATCCAAAATCGGAGAAGATGAAAATTTGGAAGTTTTTATTTTGACAGGAGATA
GGGATGCACTGCAATTGGCTTCTAAGACAACGAAAATTCTTTTTACCAAAAAAGGAATCAGCGACTTGGAAGTTTATGAT
GAAGATAAGGTGAAAGAACGGTATGAATTGACTCCGAAACAGTTTATTGATTTGAAGGGACTGATGGGAGACAGTTCGGA
TAATATTCCGGGAGTTGCAGGAATTGGAGAAAAAACAGGAATCAAACTTTTGAAAGAATACGATTCGATTGAAAATTTGA
TTTTGCATATTGATGAATTGAAAGGTGCCGTCAAGACCAAAATGGAAGCCGGATATGAGTCGGCTGTTATGAGTAAGAGG
TTGGCTACGATAGTTCGTGTAATACCGGTGGAATTTTCATTGGATGAATTGCTTTATGAAAAAAAATCCGGAGAGCAGTT
AAGAAGTTTATTTATGAAGTATGGGTTCACTTCATTGATGTCCAAGTTGGAATACAAGGAAGAAGAAACTTCTACTACAG
ATATCAACATTAGTTATGAAATAGAAGAACTTTTGCAACAAAATCCAACAGAGATTGGACTGATTGCTGCGATTGAAGAT
GGAAATATTTTGACGAAACGAATAGTACGACTTTATCTTTTGGCAGATTCCATTACTTATGCGGTGGAAGAAGAGAACAT
ACCAAAACTGAAAGAGCTGTTGGAAAGAGAGAATGTTTTTATCTATGGAAATAATCTGAAAAGAGAGTATACAGCATTGA
AACCTTATGGAATTACACTGCCTAAAATTTCTTTTGACAGCCAACTGGCGCAGTATATTCTCAATCCGTCGGAAGTAGAG
CAGGAACCGGAAAAGATTGGTATAAAATACGGTATGCCGATTGTGAGTCCGAATTTAGAGGACTTGCTTGGAAAAGGAAA
AAAGAGAATGTCTTTTTCTATGGCAAATCGTGTTCAGATGGACGAATATTTTGCTAAAATTTTGGCGATCATTTCTCATT
GCAAAACCAAAATGCTGGATATGATTCAAGAAGAAGATACCAAGTTTTTGTTTGAAAAGATAGAATTGCCTTTAATGAAA
GTATTAGGCGAGATGGAGTATCTCGGAATTGCAGTCAATGAAGATGTGCTTTGTGAATTGGAACAAGAATTTGCAAAGTT
AATTGTTCAGTATGAACAAGAAATTTATGATTTGGCGGGCGAAGAATTTAACATCAATTCACCGAAGCAGTTGGGAGTTG
TTTTATTTGAAAAACTACAACTTCCGGTCATCAAAAAGACAAAGACAGGTTATTCCACCGGAGCGGAAATTTTGGAAAAA
CTTTATGATAAACATCCTATTATCTCCAAAATCTTGTCCTATCGACAAGTGAGCAAATTACAATCTACTTATGTGATAGG
ACTGTTGTCGTTGATTAATCCTACCTCCAAAAGAATACATTCTACTTTTAACCAAACTTTGACAACAACAGGAAGGATTT
CTTCTTTGGAACCTAATTTGCAAAATATTCCCGTCCGTACAGAAATGGGTAGGGAACTGAGAAAGGTATTTGTTGCAAAA
GAGGGGTATGTTTTGGTGGATGCCGACTACTCTCAAATTGAGTTGAGAGTATTGGCGCATATGGCACAGGAAAAGAAGAT
GATAGAAGGATTCCATGGCAGTATGGATATTCATACCAAAACGGCATCAGAGGTTTTTTCTGTTCCGGTAGAGGAAGTCA
CAAAAGAATTGAGAAGTGCAGCCAAAGCGGTTAACTTCGGAATTGTTTACGGAATCAGCGATTTCGGTTTGTCTAACAAT
TTGAACATTACAAAGAAACAAGCAAAAGAATATATTGACCTTTATTTTGCCAGATATCCCGGAATCAAAACTTACATGGA
TACGATTGTAAAAGAAGTGGAGGAGTTGGGGTACAGTACCACACTTTGTGGCAGAAGACGCTATATCCCCGAAATCAAAT
CAAGTAATTTTATTGTAAAAAATATGGGGAAACGATTGGCAATGAACACTCCGATTCAGGGGTCGGCCGCCGACATTATC
AAAATAGCGATGAATCGTGTGTTTGAGTGGCTGAAAACAGAAAAAATAGATGCTGAATTGGTCTTACAAGTACATGATGA
ATTGTTGTTGGAAGTTAGGGAAGACGATGCAAAATATGTTCGTGACAAGGTGATAGAGCTTATGGAAGGTGCTTGGAGCA
TGGATGTACCGTTAAAAGTAGATGCGACCATCGGAGATTCGTGGTATGAAACAAAATAG

Protein sequence :
MKRLFLIDGNSLINRAYYALPPLMTKDGLYTNAIYGFLMMFYKAMDEYAPDYVSVAFDLKGPTFRHKEYKDYKGTRKGMP
PELAMQIQPLKELLDTMGVHRAEIEGFEADDIIGTLSKIGEDENLEVFILTGDRDALQLASKTTKILFTKKGISDLEVYD
EDKVKERYELTPKQFIDLKGLMGDSSDNIPGVAGIGEKTGIKLLKEYDSIENLILHIDELKGAVKTKMEAGYESAVMSKR
LATIVRVIPVEFSLDELLYEKKSGEQLRSLFMKYGFTSLMSKLEYKEEETSTTDINISYEIEELLQQNPTEIGLIAAIED
GNILTKRIVRLYLLADSITYAVEEENIPKLKELLERENVFIYGNNLKREYTALKPYGITLPKISFDSQLAQYILNPSEVE
QEPEKIGIKYGMPIVSPNLEDLLGKGKKRMSFSMANRVQMDEYFAKILAIISHCKTKMLDMIQEEDTKFLFEKIELPLMK
VLGEMEYLGIAVNEDVLCELEQEFAKLIVQYEQEIYDLAGEEFNINSPKQLGVVLFEKLQLPVIKKTKTGYSTGAEILEK
LYDKHPIISKILSYRQVSKLQSTYVIGLLSLINPTSKRIHSTFNQTLTTTGRISSLEPNLQNIPVRTEMGRELRKVFVAK
EGYVLVDADYSQIELRVLAHMAQEKKMIEGFHGSMDIHTKTASEVFSVPVEEVTKELRSAAKAVNFGIVYGISDFGLSNN
LNITKKQAKEYIDLYFARYPGIKTYMDTIVKEVEELGYSTTLCGRRRYIPEIKSSNFIVKNMGKRLAMNTPIQGSAADII
KIAMNRVFEWLKTEKIDAELVLQVHDELLLEVREDDAKYVRDKVIELMEGAWSMDVPLKVDATIGDSWYETK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
polA YP_281523.1 DNA polymerase I Not tested Not named Protein 8e-151 43