Gene Information

Name : Desaf_0925 (Desaf_0925)
Accession : YP_005050932.1
Strain : Desulfovibrio africanus Walvis Bay
Genome accession: NC_016629
Putative virulence/resistance : Resistance
Product : copper-translocating P-type ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1008662 - 1010791 bp
Length : 2130 bp
Strand : -
Note : TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: drt:Dret_1262 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated regio

DNA sequence :
ATGGATCACGACGAACATGCACGGCACGGACAGCCGCAGCGGGAGCACGCACAAGGCTCATCGCGGGAATGGCGCGCCGA
ACATGGCGATCACGGCGGGCATGACGCGCACGGAGATCATTCCCAGGGCCAGGGCAAAGGCGGTCACGGAGGCCACGGCA
AGGATCACGCGTCGCACCACCGCATGATGCTGCGCGATTTCCGGCGGCGCTTCATCGTCAGCATCATTCTGACCGTGCCG
GTCCTGCTCATCTCGCCCATGTTCAAGGAATTGGTCGGGCTGGGCGACTTCCTGCGTTTCCCGGGCGAGGGCTACGCGCT
TTTCGCCTTCTCCTCGCTCATCTACTTCTACGGCGGCTGGCCCTTCCTCAAGGGGCTTTTCGACGAACTGCGCGGCAAAC
AGCCGGGCATGATGACGCTCATCGGCCTGGCCATCACAGTGGCATACGTCTACAGCTCGCTCGTGGTCTTCGTTCTGCCG
GGCAAGACCTTCTTCTGGGAGCTGGCCACGCTCGTGGACATCATGCTCCTGGGCCACTGGATCGAAATGCGCTCGGTCAT
GTCCGCCTCCTCGGCCCTGGAGGAACTGGCCCGGCTGCTGCCCAGCGAGGCGCACAAGCTCGTGGACAACGAGCGCACCG
AGGACGTCTCCGTGGAGGATCTCGTCTCGGGCGACCGCATCCTCATCAAGCCCGGCGAAAAGCTCCCCGCCGACGGCGAG
ATCGTCGAGGGCGAGTCCTCGGTGAACGAGGCCATGCTCACGGGCGAGGCCACGCCCGTGGACAAGAAGCCCGGCGACAA
GGTCATCGGCGGTTCGGTCAACGGCGAGGGCTCGCTCACCGTGGAGGTGCGCCAGACCGGCAAGGACTCCTACCTGGCCC
AGGTCATCGACCTCGTGCAGAAGGCCCAGGAAAGCAAGTCCCGCTCCCAGGACACGGCCAACCGGGCCGCCATGTGGCTG
ACCTTCATCGCCCTGGCCGCCGGCGGGCTGACCATGATCGCCTGGTGGGCATTCATCGGCCGCGAGTTCGCCTTCTCCCT
GGAGCGCACTGTCACGGTCATGGTCATCACCTGTCCGCACGCCTTGGGTCTGGCCGTGCCGTTGGTGGTGGCCGTTTCCA
CTTCGCTGGCCGCGGGCAGCGGCTTTCTCATCCGCGACCGCGGGGCCTTCGAGCGCGCCCGGAACATCGAGGCCGTGCTC
TTCGACAAGACCGGAACCCTGACCCTGGGCGAGTTCCGCGTGGCCGAGACGGCCTCCTTCGGTGACATGGACAAGGAAGA
GGTCCTGCGCCTAGCCGCGTCCGTGGAAGCGGCCTCGGAGCACCCCATCGCCAGGGGCATCATGGCCACGGCCGAGGAGC
AGAACGTTAAGACCGCGCGCATCGAGGATTTCCAGGCCATCAAGGGCAAGGGGGCCAAGGCGCGAATGGAAGACCGCGAA
GTGGCCGTGGTCAGCGAGGGCTACCTGCGCGAGAGGGGGCTCAAGGCTCCGGACAAGTCCATGGAGCCGCTGCGCGCGGG
CGTGCGCACCCTGGTCTTCGTGGTCGTGGACGGCCAGCCCGTGGGCGCATTGGCCCTGGCTGACAAGGTGCGCGAGAGTT
CCAAACAGGCCGTGGCCGAGCTCAAGGAGCTTGGGGTGCGCTGCATCATGATCACCGGCGACAACGGCCGCACGGCCGAA
GCCGTGGCCCGCGAGATCGGGCTGGACGAGTTCTTCGCCGAGGTCCTGCCCGACAAGAAGGCCGAGAAGGTCAAGGAGGT
CCAGGATCGCGGCCTGACTACGGCCATGGTCGGCGATGGCATCAACGACGCGCCCGCCCTGGCCCAGGCCGACATCGGCA
TCGCCATCGGAGCGGGCACGGACGTGGCCATGGAGACGGCGGACATCGTACTGGTGAAGAGCGACCCGCGCGACGTGGTG
GCGATCATCAAGCTGGCCGGGGCAACGCGTCGCAAGATGATCCAGAACCTGTTCTGGGCCACGGGCTACAACGCCTTCGC
CATCCCCCTTGCCGCGGGCGTGCTGGCCCCGTGGGGCATTCTGCTGTCGCCGGCAGCCGGGGCGATCCTCATGTCCCTGT
CCACGGTCATCGTGGCCATCAACGCGCGGCTGCTACGCTTTCCCCGCTAG

Protein sequence :
MDHDEHARHGQPQREHAQGSSREWRAEHGDHGGHDAHGDHSQGQGKGGHGGHGKDHASHHRMMLRDFRRRFIVSIILTVP
VLLISPMFKELVGLGDFLRFPGEGYALFAFSSLIYFYGGWPFLKGLFDELRGKQPGMMTLIGLAITVAYVYSSLVVFVLP
GKTFFWELATLVDIMLLGHWIEMRSVMSASSALEELARLLPSEAHKLVDNERTEDVSVEDLVSGDRILIKPGEKLPADGE
IVEGESSVNEAMLTGEATPVDKKPGDKVIGGSVNGEGSLTVEVRQTGKDSYLAQVIDLVQKAQESKSRSQDTANRAAMWL
TFIALAAGGLTMIAWWAFIGREFAFSLERTVTVMVITCPHALGLAVPLVVAVSTSLAAGSGFLIRDRGAFERARNIEAVL
FDKTGTLTLGEFRVAETASFGDMDKEEVLRLAASVEAASEHPIARGIMATAEEQNVKTARIEDFQAIKGKGAKARMEDRE
VAVVSEGYLRERGLKAPDKSMEPLRAGVRTLVFVVVDGQPVGALALADKVRESSKQAVAELKELGVRCIMITGDNGRTAE
AVAREIGLDEFFAEVLPDKKAEKVKEVQDRGLTTAMVGDGINDAPALAQADIGIAIGAGTDVAMETADIVLVKSDPRDVV
AIIKLAGATRRKMIQNLFWATGYNAFAIPLAAGVLAPWGILLSPAAGAILMSLSTVIVAINARLLRFPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 7e-87 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaf_0925 YP_005050932.1 copper-translocating P-type ATPase BAC0629 Protein 8e-171 64
Desaf_0925 YP_005050932.1 copper-translocating P-type ATPase BAC0079 Protein 2e-116 45
Desaf_0925 YP_005050932.1 copper-translocating P-type ATPase BAC0383 Protein 2e-106 43
Desaf_0925 YP_005050932.1 copper-translocating P-type ATPase BAC0101 Protein 3e-80 41