Gene Information

Name : Desaf_0484 (Desaf_0484)
Accession : YP_005050497.1
Strain : Desulfovibrio africanus Walvis Bay
Genome accession: NC_016629
Putative virulence/resistance : Resistance
Product : Phosphonate-transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 539765 - 540472 bp
Length : 708 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: pca:Pcar_0269 ABC-type transport system, ATP-binding component; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGCCGGCTTCCCTGGTTCGCCTGCGCGACATCCACAAGCGCTACCAGCAGGGCGAGCAGTCCGTGGAGGTGCTCAAGGG
CGTGTCCCTGGACATCGCCCAGGGCGAGTTCGTGGCCTTGCAGGGAGCGTCCGGCTCGGGCAAGTCCACGCTGCTGCACA
TCATCGGCCTGCTGGACCAGCCTAGCGATGGCAGCTACGAGCTGGAGGGCCGGGACGTGTCGCGCCTGTCCGACGACGCC
CTGTCCTCCCTGCGCAACAGGATGACCGGCTTCATCTTCCAGAGCTTCTATCTCATCCCCTATGCCACGGCCCTGGACAA
CGTCATGCTGCCCGGCCTGTACGCCGGCACGCCGCGCGCCGAGCTGCGCCGTCGCGGCCACGAGCTTCTGGAGCGCGTGG
GCCTGGGCGACCGGGTCGGCTTCACGCCCGCGCAGCTTTCCGGCGGACAGCAGCAGCGCGTGGCCATCGCCCGCGCGCTG
GTCAACGAGCCGCGCATCCTGTTGGCCGACGAGCCCACGGGCCAGTTGGATTCCAGCACGAGCGGCGAGATCATGGATCT
CATCGCCTCCATCCATGCCACGGGCATGACCGTCATCCTGGTCACGCACGACGAGGCCACGGCGACCTACGCCCAGCGGC
GCGTGCGCGTGGTGGACGGCCGCATCGAGGGCCAGGAGCGCGTCACCCCGGCCCTGGCCGGAGGCTAG

Protein sequence :
MPASLVRLRDIHKRYQQGEQSVEVLKGVSLDIAQGEFVALQGASGSGKSTLLHIIGLLDQPSDGSYELEGRDVSRLSDDA
LSSLRNRMTGFIFQSFYLIPYATALDNVMLPGLYAGTPRAELRRRGHELLERVGLGDRVGFTPAQLSGGQQQRVAIARAL
VNEPRILLADEPTGQLDSSTSGEIMDLIASIHATGMTVILVTHDEATATYAQRRVRVVDGRIEGQERVTPALAGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaf_0484 YP_005050497.1 Phosphonate-transporting ATPase NC_008702.1.4606598. Protein 4e-31 49
Desaf_0484 YP_005050497.1 Phosphonate-transporting ATPase NC_012469.1.7686878. Protein 6e-44 48
Desaf_0484 YP_005050497.1 Phosphonate-transporting ATPase CP001581.1.gene798.p Protein 2e-27 42
Desaf_0484 YP_005050497.1 Phosphonate-transporting ATPase CP001581.1.gene598.p Protein 1e-27 41