Gene Information

Name : Desaf_3773 (Desaf_3773)
Accession : YP_005053708.1
Strain : Desulfovibrio africanus Walvis Bay
Genome accession: NC_016629
Putative virulence/resistance : Resistance
Product : polyamine-transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4159770 - 4160477 bp
Length : 708 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: ppd:Ppro_1984 ABC transporter related; SMART: ATPase, AAA+ type, core

DNA sequence : 
GTGCATGCCATGCCGAAGGACATCATCGTCTCCGTGGAGCACGTCTTCAAGTCCTACCGCCGGGGCAGCCAGACCGTGCC
GGTGCTGGAAGACATCACCCTGGCCATCGGCAGGGGCGAGTACCTAGCGCTCATGGGCCCCTCAGGCTCTGGCAAGTCAA
CGCTGCTCAACCTCATCGCCGGCCTGGACCGCCCGAACTCCGGGGCCATCATGGTGGAGGGCGTGGACATCACCAGTCTG
CAGGAGTCGGACCTGGCGCATTGGCGCGCCGGGAGCGTGGGCTTCATTTTCCAGTTCTACAATCTCATTCCGGTGCTCAC
GGCCTTTGAGAACGTCGAGTTGCCGCTGCTGCTCACCAGGCTGTCCAAGCGCGAGCGGCGGGAACACGTGCTCACGGCTC
TGTCTCTGGTGGATCTGGCGGACCGCATGGACCACTATCCCCGGCAGCTTTCGGGCGGCCAGCAGCAACGCGTGGCCATC
GCCAGGGCGGTGGTCACGGACCCGGCCCTGCTGGTGGCCGACGAGCCCACGGGCGACCTGGACAGGAAGTCCGCCGCGGC
CGTGCTCGATCTCATGGACCAGCTCAACCAGGAACTGGGCAAGACGATCATTCTGGTCACCCACGATCCATCGGCGGCCA
AGCGGGCAAGACGGCTGCAGTTCCTGGACAAGGGCGTGCTCAGCGATGCTCCTCAAGATACTCTTTAG

Protein sequence : 
MHAMPKDIIVSVEHVFKSYRRGSQTVPVLEDITLAIGRGEYLALMGPSGSGKSTLLNLIAGLDRPNSGAIMVEGVDITSL
QESDLAHWRAGSVGFIFQFYNLIPVLTAFENVELPLLLTRLSKRERREHVLTALSLVDLADRMDHYPRQLSGGQQQRVAI
ARAVVTDPALLVADEPTGDLDRKSAAAVLDLMDQLNQELGKTIILVTHDPSAAKRARRLQFLDKGVLSDAPQDTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-30 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaf_3773 YP_005053708.1 polyamine-transporting ATPase NC_008702.1.4606598. Protein 2e-42 49
Desaf_3773 YP_005053708.1 polyamine-transporting ATPase NC_012469.1.7686878. Protein 5e-46 47
Desaf_3773 YP_005053708.1 polyamine-transporting ATPase CP001581.1.gene798.p Protein 9e-40 43